Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3424 ATGGCGGACTTCAACACAAGCTCAGTTGATGTCATTTTAGAGTTTCTTCGGAGGAACCGATTCACTAAAGCCGAAGCAGCTTTGCGCAGTGAGATAATTAATCGTCCTGACTTGAATGGCTTCCTTCAGAAGCTCACATTGGAAGAAAATGCCTCGTTTGTTGTGCCTCAAAGTAATAAGGGGAAGCCTGTGCTTGAGATTCAAGGGGTGGACACTCTTGAGTTTTCTAATGAACTGATCATCACGGAAATCGAGTGTGAGAATGGTCGAAATGCCACCGAAAGCAAATGGGAAACTGCTGCTCCCACTTTGGTTGAACGGAGTAAATCGGATGAAGAGGTTTGGACTAGTGATAAGAACTTCATTTTCTCCAAGACTTCAGAGGATAGCATGCTTGATTTATACTCATGGAAGTTCAACCCTGGCAAAACTCCTGTGGAGCCTTACCAAAACGATGCTGGCAGTAGGGCTAATAATATTTTGAGTTTGAAGGCCACCGTATCCCAACAATCAAAACGTCAAACTAATGAAACTGTGGATCTAAGTGTTGCCAATACCAGTTCAAAGTCTGGGGAGGAAAATGCTGCCCTTGCAGACAAAAAATCTCTTTGGCCTGGAAGTAGTAGTAAAGCCTCGGTGGATCTTAAGTACGACCTTGTGCAAAGTAAAGAACCTATGGAACTTGATCGGCAGCTTAAATTCAATAGTTCATCTCTTAAAGTGAACTTTACAGATAAACCCTGGTCAAGAGTGGATGAGAATGTGAATTCTTCTTCAGATTCCTGCAAAAATTGTGTCAAGACTGTCTTCCCCTTCTCGAAAGGGGATGTATCTACAAGCTTCGATGATGCCACTTATTCTGACAAAAAGGAGGAGAAAAAGAGAGTAGAAATTAGTGATACCAGAACATCCATAAAAGAGGTGGATGAATCAGGGAGGTCTATTTACTTGGTCAAGACACCAGTCAGTTCTGAACAGAAGTTGATTGGCAGCTTAAGATTTCCTATTCCACCTGAAAATGAGAAGGAAGAGTTTCCAAGGCTTCCTCCTGTTAAACTCAAGTCAGATGATAAGCCCCTGGTTGTTAACTGGGAAGAGAAGTTTGAGCGAGATGGGCCAACTTCAAAACCCCCTCGTACTGACAGCACTTTTCTTATTGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCGGAGGATACATCCGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCGAATGAATATTGGGACTCTGATGAATACGATGATGATGAGGATGTTGGGTACATGAGGCAACCTATTGACGATGAGACCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAAGGGAGTGGGCATGAAAGTGTTCCAGATCCTCAGGAAAGAGGTCTGGCCAAAACAGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCCGGGGAGCCATATCTTCAGGCAAATAATGTTGAACCAGTCACAGCTACTGATGATTCTATTGGTCTACCCGTTACTGAGTATGGAAGGACCAATGATAATGATTTAATGGCTCAATATGATGGGCAATTGATGGATGAAGAAGAATTGAACCTTATGTGTGCAGAACCGGTCTGGCGGGGCTTTGTCCCTCAAACTAATGAACTGATGATGCTAGGAGATGGAAGGGTATTGAATGATAATGTAAGATCACGGCTAGAGGACATCAATATGGATGATGATCAACATGGTTCTGTTAGGTCAATTGGGGTAGGGATCAATAGTGATGTTGCAGATATTGGTAGTGAAGTGCGGGAAAGTTTGGTTGGTGGTAGTAGTGAAGGAGATCTAGAATATTTCCATGATCATGACAGGCTTGGTGGTTTCAGGCACTCCCATCGTGATTTGGATAAGAAATCTACTAACAAATCTAACAAAAATAAGAACAATGACAAGAGTGAGTCAAATAAATATGTCATAGGATGTGACAGAGATGCACAGTTCCAGATAAAAACTCATGGTGATGGGAACTTCTCTTTTCCCCTATCTTTGAAGGATGGTGAGATGATTCAGACTTCCACTGATAAGTCCCTGTGGTCAAATAACGGCAATGCAGATGAAATTGATGACTGTCTTAGTGCATTTGTGGAAACTGAGGACATGCTTGCTTCGTGGAGGCAAAAGAGTAGTGATTCATCACCTGCTAGAAGTTCTAGGGATGATTATAATGCTAACAATGTAAGATCCAGAAACTCGTCTCCAACAACAATTTCAAATTATGGATATTCTGAAAGAGAGCATGTGAAGGTGGAAGAGGATGAAAAGACTGGAATTGCAAGGGAAGATGATCTAGGAGCAGAGGATGAAGAGGTAGCAGCTGTACAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAACTTGAAATCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGTTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTTACGGAGTATCTGGGATCTGCTGCTTTTAGCAAAGCTATACAAGCTCATGACTTACAGACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACATTCTTCGATTATATGATTATTTTTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTACGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCACTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCTTATGATAAGAAGATTGACATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCGCCTTCAACATTACTTGCTCGGGTGATTGGAATCATTGGTCCAATCGATCAAGGTATGCTTGCAAAAGGACGGGACACCTACAAGTACTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGATTAGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTGGCTCACTTGCTTGACGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAAGCCCTGAAACATCCATGGTTATCATACCCTTATGAACCCATATCATCTTGA 3549 0.4119 MADFNTSSVDVILEFLRRNRFTKAEAALRSEIINRPDLNGFLQKLTLEENASFVVPQSNKGKPVLEIQGVDTLEFSNELIITEIECENGRNATESKWETAAPTLVERSKSDEEVWTSDKNFIFSKTSEDSMLDLYSWKFNPGKTPVEPYQNDAGSRANNILSLKATVSQQSKRQTNETVDLSVANTSSKSGEENAALADKKSLWPGSSSKASVDLKYDLVQSKEPMELDRQLKFNSSSLKVNFTDKPWSRVDENVNSSSDSCKNCVKTVFPFSKGDVSTSFDDATYSDKKEEKKRVEISDTRTSIKEVDESGRSIYLVKTPVSSEQKLIGSLRFPIPPENEKEEFPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKPPRTDSTFLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIDDETWFLAHEIDYPSDNEKGSGHESVPDPQERGLAKTEDDDQSFAEEDSYFSGEPYLQANNVEPVTATDDSIGLPVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELMMLGDGRVLNDNVRSRLEDINMDDDQHGSVRSIGVGINSDVADIGSEVRESLVGGSSEGDLEYFHDHDRLGGFRHSHRDLDKKSTNKSNKNKNNDKSESNKYVIGCDRDAQFQIKTHGDGNFSFPLSLKDGEMIQTSTDKSLWSNNGNADEIDDCLSAFVETEDMLASWRQKSSDSSPARSSRDDYNANNVRSRNSSPTTISNYGYSEREHVKVEEDEKTGIAREDDLGAEDEEVAAVQEQVRQIKAQEEELEIFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLQTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALHFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPSTLLARVIGIIGPIDQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLDVNPKKRPSASEALKHPWLSYPYEPISS* 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3424 1182 SUPERFAMILY Protein kinase-like (PK-like) 860 1175 IPR011009 -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 167 193 - -
Pvu2g3424 1182 PANTHER - 10 1180 - -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 754 790 - -
Pvu2g3424 1182 Coils Coil 813 843 - -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 478 512 - -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 659 686 - -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 167 207 - -
Pvu2g3424 1182 Gene3D Transferase(Phosphotransferase) domain 1 925 1173 - -
Pvu2g3424 1182 Gene3D Phosphorylase Kinase; domain 1 865 952 - -
Pvu2g3424 1182 MobiDBLite consensus disorder prediction 478 505 - -
Pvu2g3424 1182 ProSiteProfiles Protein kinase domain profile. 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3424 1182 SMART serkin_6 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3424 1182 CDD PKc_DYRK_like 871 1173 - -
Pvu2g3424 1182 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Pvu2g3424 1182 PANTHER DUAL SPECIFICITY PROTEIN KINASE 10 1180 - -
Pvu2g3424 1182 Pfam Protein kinase domain 871 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3424 Pvu-Chr2 48964031 48976243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3424 870 1168 MAP Kinase Gene Family AT5G19010 30.721 9.11e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pvu2g3424 Pkinase 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3424 - - lang:109331412 1842.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2174 3 42583644 42590598 Pvu2g3424 2 48964031 48976243 ECH
Pvu2g3424 2 48964031 48976243 Pvu2g3424 2 48964031 48976243 ECH
Pvu2g3424 2 48964031 48976243 Pvu4g1536 4 42526556 42534615 PCT