Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3411 ATGCTGCCTCACAAGCACACCCTCGTGGTTGTGGCGGCCACTCTGGCGCTCATGCTCGCCGCAGCATACGCAGATCTGGCCTCCGAGCGAGCCGCATTGCTCGCTCTCCGCTCTGCTGTCGGCGGCAGAACCCTCTTCTGGAACGCCACCAGGGAGAGCCCCTGCACGTGGGCCGGGGTCCAATGCGAGCGCGACCACGTCGTCGAGCTTCACCTCCCCGGCGTCGCTCTCTCCGGCCAAATCCCTCTCGGAATATTCGGCAATCTGACACAGCTGCGCACCCTGAGTCTCCGCTTCAACGCGCTGCGGGGTTCCGTGCCTTCAGATCTGGCGGCGTGCGTTAACCTTCGGAACCTGTACATTCAGCGGAACCTCCTCAGCGGCGCAATCCCTGCGTTCTTGTTCGAGTTACCGGACCTGGTTCGGTTGAACATGGGCTTCAACAACTTCTCAGGCCCGTTTCCGACGGGCTTCAACAGCCTAACGCGGTTGAAGACTTTGTTTGTGGAGAACAACCAGCTCCAGGGCCCAATCCCCGACCTGGGGAAATTGAGCCTGGATCAGTTCAACGTCTCCAACAACCTCCTCAACGGCTCTGTCCCTCTCAAGCTTCAGACATTCCCTCAGGATTCCTTTCTTGGCAACTCCCTCTGTGGCCGCCCACTCTCTCTCTGCCCCGGAGATATAGCGGATCCTATCTCCGTCGACAACAACGCCAAGCCCAACAACAAAACCAACCACAAGCTATCTGCCGGCGCCATTGCGGGGATTGTTGTCGGATCGGTTGTGTTTCTTCTGCTGCTCGTGTTCCTCTTCATTTTCCTGTGCAGGAGCAAGACTGCCAAGAAGACCAGCGCCGTCGACATTGCTACTGTCAAACATCCTGAGGCCGACGCCCAGGTTCTTGCAGAGAAGGGGCTTCCGGATGTCGAGAACGGCGGTCATGCCAACGGCAATTCTGCGGTGGCTGTGGCTGCGGCTGCGGCTGCGGTTTCGGCGGGGAATAAGGCCGAAGGGAACAGTGGTGGGGCGGCGAAGAAGTTGGTGTTTTTCGGTAATGCGGCTAAGGCGTTTGATTTGGAGGATTTGCTCAGAGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTCGGGACGGCGTATAAGGCGGTGCTGGAGGCAGGGCCCGTGGTGGCGGTGAAGAGGTTGAAGGATGTGACGATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAAGCGGTGGGAGCTATGGATCATGAGAGTTTGGTTCCTCTCAGAGCTTTCTATTTCAGCAGAGATGAGAAGCTCCTTGTCTATGATTACATGCCCATGGGAAGCTTGTCTGCACTTTTACATGGAAACAAAGGGGCGGGTAGGACGCCACTGAATTGGGAAGTGAGATCAGGTATTGCACTTGGAGCAGCCCGTGGCATTGAGTACCTGCATTCACGAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCCAACATCCTCTTAACCAAATCATATGATGCCAGAGTGTCTGACTTTGGCCTTGCACATCTCGTTGGCCCCTCCTCCACCCCCAACAGGGTCGCCGGCTACCGTGCACCTGAGGTGACTGATCCTCGCAGGGTGTCTCAGAAGGCAGACGTGTACAGTTTTGGTGTGCTACTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTAGACCTTCCCAGATGGGTTCAATCTGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTCAGGTATCGGAATGTGGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATAGAAGAGTTGCGAAGGTCTAGCCTTAAAGAGGAGCAGGAGCAGGACCAAATCCAACATGATCCCGTCAATGATATAGAATTGTAG 1977 0.5508 MLPHKHTLVVVAATLALMLAAAYADLASERAALLALRSAVGGRTLFWNATRESPCTWAGVQCERDHVVELHLPGVALSGQIPLGIFGNLTQLRTLSLRFNALRGSVPSDLAACVNLRNLYIQRNLLSGAIPAFLFELPDLVRLNMGFNNFSGPFPTGFNSLTRLKTLFVENNQLQGPIPDLGKLSLDQFNVSNNLLNGSVPLKLQTFPQDSFLGNSLCGRPLSLCPGDIADPISVDNNAKPNNKTNHKLSAGAIAGIVVGSVVFLLLLVFLFIFLCRSKTAKKTSAVDIATVKHPEADAQVLAEKGLPDVENGGHANGNSAVAVAAAAAAVSAGNKAEGNSGGAAKKLVFFGNAAKAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEAVGAMDHESLVPLRAFYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYRNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEEQEQDQIQHDPVNDIEL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3411 658 Gene3D Ribonuclease Inhibitor 141 225 IPR032675 -
Pvu2g3411 658 MobiDBLite consensus disorder prediction 637 658 - -
Pvu2g3411 658 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 657 - -
Pvu2g3411 658 PANTHER OS05G0588300 PROTEIN 4 657 - -
Pvu2g3411 658 Gene3D Phosphorylase Kinase; domain 1 331 439 - -
Pvu2g3411 658 ProSiteProfiles Protein kinase domain profile. 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3411 658 Pfam Protein kinase domain 368 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3411 658 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pvu2g3411 658 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Pvu2g3411 658 SUPERFAMILY L domain-like 47 205 - -
Pvu2g3411 658 CDD STKc_IRAK 371 634 - -
Pvu2g3411 658 Gene3D Transferase(Phosphotransferase) domain 1 440 656 - -
Pvu2g3411 658 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
Pvu2g3411 658 SUPERFAMILY Protein kinase-like (PK-like) 369 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3411 Pvu-Chr2 48888454 48891466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3411 25 635 Receptor kinase-like Gene Family AT1G48480 64.800 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu2g3411 Pkinase 2.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3411 - - gmx:100818955 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3411 2 48888454 48891466 Pvu4g1579 4 43007023 43009773 PCT