Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g3411 | ATGCTGCCTCACAAGCACACCCTCGTGGTTGTGGCGGCCACTCTGGCGCTCATGCTCGCCGCAGCATACGCAGATCTGGCCTCCGAGCGAGCCGCATTGCTCGCTCTCCGCTCTGCTGTCGGCGGCAGAACCCTCTTCTGGAACGCCACCAGGGAGAGCCCCTGCACGTGGGCCGGGGTCCAATGCGAGCGCGACCACGTCGTCGAGCTTCACCTCCCCGGCGTCGCTCTCTCCGGCCAAATCCCTCTCGGAATATTCGGCAATCTGACACAGCTGCGCACCCTGAGTCTCCGCTTCAACGCGCTGCGGGGTTCCGTGCCTTCAGATCTGGCGGCGTGCGTTAACCTTCGGAACCTGTACATTCAGCGGAACCTCCTCAGCGGCGCAATCCCTGCGTTCTTGTTCGAGTTACCGGACCTGGTTCGGTTGAACATGGGCTTCAACAACTTCTCAGGCCCGTTTCCGACGGGCTTCAACAGCCTAACGCGGTTGAAGACTTTGTTTGTGGAGAACAACCAGCTCCAGGGCCCAATCCCCGACCTGGGGAAATTGAGCCTGGATCAGTTCAACGTCTCCAACAACCTCCTCAACGGCTCTGTCCCTCTCAAGCTTCAGACATTCCCTCAGGATTCCTTTCTTGGCAACTCCCTCTGTGGCCGCCCACTCTCTCTCTGCCCCGGAGATATAGCGGATCCTATCTCCGTCGACAACAACGCCAAGCCCAACAACAAAACCAACCACAAGCTATCTGCCGGCGCCATTGCGGGGATTGTTGTCGGATCGGTTGTGTTTCTTCTGCTGCTCGTGTTCCTCTTCATTTTCCTGTGCAGGAGCAAGACTGCCAAGAAGACCAGCGCCGTCGACATTGCTACTGTCAAACATCCTGAGGCCGACGCCCAGGTTCTTGCAGAGAAGGGGCTTCCGGATGTCGAGAACGGCGGTCATGCCAACGGCAATTCTGCGGTGGCTGTGGCTGCGGCTGCGGCTGCGGTTTCGGCGGGGAATAAGGCCGAAGGGAACAGTGGTGGGGCGGCGAAGAAGTTGGTGTTTTTCGGTAATGCGGCTAAGGCGTTTGATTTGGAGGATTTGCTCAGAGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTCGGGACGGCGTATAAGGCGGTGCTGGAGGCAGGGCCCGTGGTGGCGGTGAAGAGGTTGAAGGATGTGACGATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAAGCGGTGGGAGCTATGGATCATGAGAGTTTGGTTCCTCTCAGAGCTTTCTATTTCAGCAGAGATGAGAAGCTCCTTGTCTATGATTACATGCCCATGGGAAGCTTGTCTGCACTTTTACATGGAAACAAAGGGGCGGGTAGGACGCCACTGAATTGGGAAGTGAGATCAGGTATTGCACTTGGAGCAGCCCGTGGCATTGAGTACCTGCATTCACGAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCCAACATCCTCTTAACCAAATCATATGATGCCAGAGTGTCTGACTTTGGCCTTGCACATCTCGTTGGCCCCTCCTCCACCCCCAACAGGGTCGCCGGCTACCGTGCACCTGAGGTGACTGATCCTCGCAGGGTGTCTCAGAAGGCAGACGTGTACAGTTTTGGTGTGCTACTCTTGGAACTTCTGACTGGGAAGGCACCTACCCATGCTCTCCTGAATGAGGAAGGAGTAGACCTTCCCAGATGGGTTCAATCTGTGGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTCAGGTATCGGAATGTGGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATAGAAGAGTTGCGAAGGTCTAGCCTTAAAGAGGAGCAGGAGCAGGACCAAATCCAACATGATCCCGTCAATGATATAGAATTGTAG | 1977 | 0.5508 | MLPHKHTLVVVAATLALMLAAAYADLASERAALLALRSAVGGRTLFWNATRESPCTWAGVQCERDHVVELHLPGVALSGQIPLGIFGNLTQLRTLSLRFNALRGSVPSDLAACVNLRNLYIQRNLLSGAIPAFLFELPDLVRLNMGFNNFSGPFPTGFNSLTRLKTLFVENNQLQGPIPDLGKLSLDQFNVSNNLLNGSVPLKLQTFPQDSFLGNSLCGRPLSLCPGDIADPISVDNNAKPNNKTNHKLSAGAIAGIVVGSVVFLLLLVFLFIFLCRSKTAKKTSAVDIATVKHPEADAQVLAEKGLPDVENGGHANGNSAVAVAAAAAAVSAGNKAEGNSGGAAKKLVFFGNAAKAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEAVGAMDHESLVPLRAFYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYRNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEEQEQDQIQHDPVNDIEL* | 659 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g3411 | 658 | Gene3D | Ribonuclease Inhibitor | 141 | 225 | IPR032675 | - | |
Pvu2g3411 | 658 | MobiDBLite | consensus disorder prediction | 637 | 658 | - | - | |
Pvu2g3411 | 658 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 4 | 657 | - | - | |
Pvu2g3411 | 658 | PANTHER | OS05G0588300 PROTEIN | 4 | 657 | - | - | |
Pvu2g3411 | 658 | Gene3D | Phosphorylase Kinase; domain 1 | 331 | 439 | - | - | |
Pvu2g3411 | 658 | ProSiteProfiles | Protein kinase domain profile. | 365 | 634 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu2g3411 | 658 | Pfam | Protein kinase domain | 368 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu2g3411 | 658 | Pfam | Leucine rich repeat N-terminal domain | 27 | 62 | IPR013210 | - | |
Pvu2g3411 | 658 | ProSitePatterns | Protein kinases ATP-binding region signature. | 371 | 393 | IPR017441 | GO:0005524 | |
Pvu2g3411 | 658 | SUPERFAMILY | L domain-like | 47 | 205 | - | - | |
Pvu2g3411 | 658 | CDD | STKc_IRAK | 371 | 634 | - | - | |
Pvu2g3411 | 658 | Gene3D | Transferase(Phosphotransferase) domain 1 | 440 | 656 | - | - | |
Pvu2g3411 | 658 | Gene3D | Ribonuclease Inhibitor | 28 | 138 | IPR032675 | - | |
Pvu2g3411 | 658 | SUPERFAMILY | Protein kinase-like (PK-like) | 369 | 636 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g3411 | Pvu-Chr2 | 48888454 | 48891466 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g3411 | 25 | 635 | Receptor kinase-like Gene Family | AT1G48480 | 64.800 | 0.0 | 785 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Pvu2g3411 | Pkinase | 2.7e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g3411 | - | - | gmx:100818955 | 1074.31 |