Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3408 ATGGCGAGGCCAGAAAGAACGCGTAGACAAAAAAGCCTGGAGACTCTAATGGACTCGGACAAACCAGGAATCGGAAGAAATGTGAACCAACTGGGACCCCAGAAGTCCACTCCTGGCAATGGCCTTGAATTCAATAACCTCTCGTATAGCATCATAAAAAAGCAGAAAAAGGATGGAGTATGGATCAAGAAAGAAACATATCTTCTTCATGATATCTCTGGCCAAGCAAAAAAAGGTGAAATTATGGCAGTCATGGGGCCTAGTGGTGCTGGAAAATCCACCTTTCTTGATGCATTGGCAGGGAGAATTGCTCGAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAATTACTACAAGCTACATGAAAATGGTGTCATCATATGTGATGCAGGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCTGAAGTTCGGCTTCCTCCTTCCATTTCCAGGGCTGAAAAGAAGAAGAGGGTGTATGAAATCCTTGACCAACTGGGCTTACAGAGTGCTACACATACATATATTGGTGACGAAGGAAGGAGAGGAGTGTCAGGAGGGGAACGACGAAGAGTATCTATTGGCATAGACATCATCCATAAGCCATCAGTTCTGTTTCTTGACGAACCTACCTCAGGCCTTGACTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCGTTGTCCTTATGACCATACACCAGCCTTCATTTAGAATCCAAACGCTCCTGGATCAGATCACCGTCCTTGCAAGGGGAACATTGATATACATGGGGAAGCCAGATGCACTACAAGCTCATTTGTCCAGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAAGTGAATATGATCAAGCAACAGTTGGGCTTGACCCCCTAATCCAATTCCAACGTGATGGCCTCAAACCTGACCCAGCAGCCATGACCCCTGTTCCAAAAACTCCAAGGACACTTTTCAGAAGGAACACCCCTGCATCTAAACACTTGATTAGCCTACGCAGCCAAGGATTTATTGCTGGAACACAACAACCTCATTCTGCACAGTTTAGTTATCGCGACGACGATGACGATGATGAGAATTTCGATAACTCCCTTGAAAGGAATACTGTTCCAACACCAAGGAATATGACCAGTGGTGTTCACCCACGTTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCCAAAGATTTCTCTATCTGGCTTTACCATGGTGTCGTAGGAACACCGCGGCGCCAACCATCATGGACTCCAGCAAGAACACCAGGATGGACGCCAGGGAAAACACCCATGTCAGGACCAAGAAGTGCAGCTTCCAACCAATATTCTGCAGCTTATCGGTATCCTTATCGCCCCCCAAAAACTCCTGCAGTGGATGACCAGTCTATGGACTACTCGGCAAATTCATATGCCCCTTCGGTTGAAGGATTTGAGATTGAGGAAGTGCTTGATGAGCCAGTCTTAGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCGTGGCGAACAGCACTAAATGTAATTCGCACCCCGGAACTCTTCCTCTCCCGTGAGATTGTGTTAGCTGTAATGGCACTTATCCTGTCCAGCATTTTTGGAAATCTGAGTCATCATTCTTTCAAAGACGTCAATAGGCTCCTCAATTTCTACATATTTGCAGTGTGCCTTGTTTTCTTTTCCTCCAATGACGCAGTCCCATCTTTTATCATGGAGAGGTTCATCTTCATCAGGGAGACTTCCCATAACGCTTACCGTGCTTCTTCATATGTTATTTCTTCCCTCATTGTTTACCTCCCATTTTTCGCTGTTCAAGGACTCACATTTGCTGCCATAACCAAAGAAATGCTCCACTTGAATAGCAATCTCTGGTATTTCTGGCTGACACTTTATGCCTCCCTTATTACTACCAACGGATATGTGATGCTTGTCAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCAAAGTCAGATACCCATTTATTGGAGGTGGCTTCACTATGTTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAAGAACCTCGACTGCTACACAGGAAACAAAGCAGAATTATCCCCCGGACCATTAGGAGACTTGAAGCCCAGCAAACATCATAACACCAGCCTGCCAGCTAACTGCTTATTAGGGGTAGATATCTTGTCCTCAATGGATATCAAAATGCAAAACATATGGTATGACATTTTAATCCTGCTAGGTTGGGGTGTTCTTTACAGGTTGTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAACGAGAGAAAATGA 2442 0.4435 MARPERTRRQKSLETLMDSDKPGIGRNVNQLGPQKSTPGNGLEFNNLSYSIIKKQKKDGVWIKKETYLLHDISGQAKKGEIMAVMGPSGAGKSTFLDALAGRIARGSLEGSVRIDGKPITTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRAEKKKRVYEILDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSVLFLDEPTSGLDSTSAYSVVEKVKDIARGGSVVLMTIHQPSFRIQTLLDQITVLARGTLIYMGKPDALQAHLSRFGRPVPDGENSIEYLLDVISEYDQATVGLDPLIQFQRDGLKPDPAAMTPVPKTPRTLFRRNTPASKHLISLRSQGFIAGTQQPHSAQFSYRDDDDDDENFDNSLERNTVPTPRNMTSGVHPRLASQFYKDFSAKDFSIWLYHGVVGTPRRQPSWTPARTPGWTPGKTPMSGPRSAASNQYSAAYRYPYRPPKTPAVDDQSMDYSANSYAPSVEGFEIEEVLDEPVLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLAVMALILSSIFGNLSHHSFKDVNRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAAITKEMLHLNSNLWYFWLTLYASLITTNGYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKQSQIPIYWRWLHYVSAIKYPFEALLTNEFKNLDCYTGNKAELSPGPLGDLKPSKHHNTSLPANCLLGVDILSSMDIKMQNIWYDILILLGWGVLYRLFFYLVLRFYSKNERK* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3408 813 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 807 - -
Pvu2g3408 813 Gene3D - 41 287 IPR027417 -
Pvu2g3408 813 PANTHER ABC TRANSPORTER 3 807 - -
Pvu2g3408 813 MobiDBLite consensus disorder prediction 367 403 - -
Pvu2g3408 813 MobiDBLite consensus disorder prediction 1 16 - -
Pvu2g3408 813 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Pvu2g3408 813 Pfam ABC-2 type transporter 524 730 IPR013525 GO:0016020|GO:0140359
Pvu2g3408 813 CDD ABCG_EPDR 42 275 - -
Pvu2g3408 813 SMART AAA_5 78 278 IPR003593 -
Pvu2g3408 813 MobiDBLite consensus disorder prediction 436 460 - -
Pvu2g3408 813 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Pvu2g3408 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 285 IPR027417 -
Pvu2g3408 813 MobiDBLite consensus disorder prediction 1 39 - -
Pvu2g3408 813 Pfam ABC transporter 69 221 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3408 Pvu-Chr2 48879397 48882311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3408 68 289 Calmodulin-binding Proteins AT2G36910 27.391 6.87e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3408 K05681 - gmx:100819497 1397.1