Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3403 ATGTCTTCTCTCCTAGATGATTGCAGGGAACACTTATTGGAAGTGGATGCAAATGCCAAACTAAAATTCGAGATAAGGAATCTGACGAGAGTTTCCCACGATGGGGTTTCAATCCTCAAAGGTATCAACCTTGATATCCCAAAGGGTGTCACCGTTGGGATCATAGGCCCCAGCGGCAGCGGCAAGTCAACGCTCTTGAGAGCCTTAAACCGCCTCTGGGAACCGCCCTCCGCCTCCGTCTTCCTCGACGGCCAAGACATCTCCCATCTCGACGTTCTCTCTCTCCGCCGGAAAGTTGGCATGCTCTTTCAACTCCCTGCCCTCTTTCAAGGCACAGTTGGCGACAATGTGAGGTATGGACCAGGGCTTAGAGGGAAAAAGCTAAGCGATGATGAGGTGCGCAAGTTGCTGGAAATGGCAGACTTAGATGCTTCTTTCATGGACAAGTCCGGGGCTGAACTCTCTGTGGGTCAAGCTCAAAGGGTTGCACTTGCTAGGACTTTGGCTAATTCACCAGAGGTTTTGTTGTTGGATGAGCCTACTAGTGCGTTGGATCCTATATCGACAGAGAACATAGAAGATGCCCTGATGAAGCTGAACAAGAACAGGGGCATGACAGTGATCATGGTCTCTCATAGTATCAAACAAATACAGAGGATTGCTGACATGGTGTGTCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATAAACTCTCCGAGGCCAACCATCCCATGGCACGAAGGTTTCTTGAACTCAGTTCATAG 774 0.491 MSSLLDDCREHLLEVDANAKLKFEIRNLTRVSHDGVSILKGINLDIPKGVTVGIIGPSGSGKSTLLRALNRLWEPPSASVFLDGQDISHLDVLSLRRKVGMLFQLPALFQGTVGDNVRYGPGLRGKKLSDDEVRKLLEMADLDASFMDKSGAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNRGMTVIMVSHSIKQIQRIADMVCLLVDGEIVEVLKPDKLSEANHPMARRFLELSS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3403 257 SMART AAA_5 48 231 IPR003593 -
Pvu2g3403 257 Pfam ABC transporter 39 182 IPR003439 GO:0005524
Pvu2g3403 257 Gene3D - 19 256 IPR027417 -
Pvu2g3403 257 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 14 257 - -
Pvu2g3403 257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 244 IPR027417 -
Pvu2g3403 257 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524
Pvu2g3403 257 CDD ABC_PstB_phosphate_transporter 23 241 IPR005670 GO:0005315|GO:0016020|GO:0035435
Pvu2g3403 257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 254 IPR003439 GO:0005524
Pvu2g3403 257 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 14 257 IPR005670 GO:0005315|GO:0016020|GO:0035435
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3403 Pvu-Chr2 48853674 48855068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3403 36 247 Calmodulin-binding Proteins AT2G36910 31.532 1.24e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3403 K02068 - gmx:100791365 412.92