Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3391 ATGTGGATGGTTGGTTACAACGAAGGTGGTGAGTTCAGCATGGCTGATTATGGACTCAATGGAAGAAAACTCAGGCCTCTCATGCCAAGGCCAGTCACTTCTCCCAACAACACTCCAAACACAAACTCTCCATGCTTGAGCCGCATCCATCATGGCAACGACTTTTTTTCACAATATCACAATCTGGCATCAGTGGCGGATCAGGGCAAGAGAGAGTTCAATCCTCCACCCGTAGTGGTGAGTTCAAGGTGGAATCCAACTCCGGAGCAGCTAAGGGCATTGGAGGAATTGTACAGAAGAGGGACAAGAACACCATCTGCCGAGCAAATCCAACAAATCACGGCACAGCTTCGAAGGTTTGGAAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCGAGGGAAAGACAGAAACGCCGCCGTCAAATGGAGTCAGCGGCTGAGGGTCATCACACCCGTGACTTTGATGGTACTCTTGACAAGAAAGACTTAGGGGCAAGTAGGACAGTGTTTGAAGTGGAACAGACCAAGAACTGGGAATCCTCTACAAACTGCAGTACCCTTGCAAAGGAATCTGTTTCAATACAAAGGGCAGCAGCAAAAGCAGATTGTAGAACAGAAGGATGGCTCCAATTCGATGAAGAAGAGTTACACCACACACAGCACACAAGAAACTTAATGGAGAGGAATGCCACGTGGCACATGATGCAGTTATCTTGTCCTCCCCCTCCTTCGGTTTCACCCCACCTCATAAACACACCTCCTACCATCTCTACTTCTAGCATGGCCACCACACCCTCTGTCACAGCAAGAGTAATGGACCCAAAGCTCATTAAGACTCATGATCTCAGCTTCTTCATTTCACCTAACCGAGAAAACGGTATTATCCACTTAAGCAGTATCAACACCGATGATAATTCTGTGGAATCTCAAACACTTCAACTTTTCCCAATAAGGAACGGGGATGAAAGCAGTGACAACCTTAACCACCACAAAGAGACAGAGGTATCGGTCTCAGCAATGAATGCCCCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAAGTGA 1080 0.4657 MWMVGYNEGGEFSMADYGLNGRKLRPLMPRPVTSPNNTPNTNSPCLSRIHHGNDFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHTRDFDGTLDKKDLGASRTVFEVEQTKNWESSTNCSTLAKESVSIQRAAAKADCRTEGWLQFDEEELHHTQHTRNLMERNATWHMMQLSCPPPPSVSPHLINTPPTISTSSMATTPSVTARVMDPKLIKTHDLSFFISPNRENGIIHLSSINTDDNSVESQTLQLFPIRNGDESSDNLNHHKETEVSVSAMNAPSQFFEFLPLKK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3391 359 SMART HOX_1 79 146 IPR001356 GO:0003677
Pvu2g3391 359 CDD homeodomain 83 143 IPR001356 GO:0003677
Pvu2g3391 359 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
Pvu2g3391 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 61 358 IPR044555 GO:0003700|GO:0099402
Pvu2g3391 359 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Pvu2g3391 359 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Pvu2g3391 359 MobiDBLite consensus disorder prediction 143 164 - -
Pvu2g3391 359 MobiDBLite consensus disorder prediction 140 164 - -
Pvu2g3391 359 Gene3D - 80 142 - -
Pvu2g3391 359 PANTHER WUSCHEL, PUTATIVE-RELATED 61 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3391 Pvu-Chr2 48797555 48800136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3391 1 358 Wox Gene Family AT3G18010 40.874 2.54e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu2g3391 Homeodomain 9.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3391 - - gmx:100777274 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3391 2 48797555 48800136 Pvu2g3391 2 48797555 48800136 ECH