Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3383 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGAACTGCTTGCGCCCACTCTTACTCCTACAACTAATAACACTCTTCTTACTGACACAAAACCATCCGAAAATCGCACCATAACTTGCCCCTCATGTGGCCATAACATTGAATTCCAAGATCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGTGTGAAATTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAGGTACTTTGTGATGTTCCCAAGCTCCATCCTCTAATTGATGAGTTCATACCAACGCTTGAAGGGGAGAACGGGATCTGTTATACGCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATCCGCCACTTCTTTCATAGGCCATCCAAAGCATACACAACCGGAACAAGGAAGAGAAGAAAGGTTCACACCGATGAAGAGGGGAGCGAGACAAGGTGGCATAAAACAGGCAAAACGAGACCAGTTTTTGTTGGTGGTGCTGTGAAGGGTTTCAAAAAAATACTGGTGCTCTACACCAACTATGGGAGGCAAAAGAAGCCGGAGAAGACGAATTGGGTGATGCATCAATACCATCTAGGCAGCAATGAAGAAGAGAAAGATGGAGAGTTAGTGGTTTCAAAGGTGTTCTACCAAACACAACCTCGACAATGTGGTAATTCCATTACAAAGCAGGATCTGTATCAAAGTGTTGATGATGAGGATATAATACCTAGAAGTGGAACTCTTATGGAGTACTACAACCCTTCTTTCATAAATTATGACCATGTGGGTGGTCGCAACAATAGGGAAGCTTCACCTCAACTTATTCCAAATTTGGTCATGCAAGCTGATACCTCTTCTTTCATTCGATTAGCAATGGATGCCACCAAAGCCAGGCTCGACACAAAATAG 924 0.4383 MTWCNDSDEERGIELLAPTLTPTTNNTLLTDTKPSENRTITCPSCGHNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVLCDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSITKQDLYQSVDDEDIIPRSGTLMEYYNPSFINYDHVGGRNNREASPQLIPNLVMQADTSSFIRLAMDATKARLDTK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3383 307 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Pvu2g3383 307 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
Pvu2g3383 307 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 291 - -
Pvu2g3383 307 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
Pvu2g3383 307 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 291 IPR044799 GO:0003700
Pvu2g3383 307 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3383 Pvu-Chr2 48703459 48707451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3383 1 233 NAC Transcription Factor Family AT4G28500 72.222 6.59e-125 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g3383 NAM 3.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3383 - - gmx:100795920 541.962