Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3345 ATGGGGAAGAAGAAGAAGAGGGTTTCCTCCAAGGTGTGGTGTTACTACTGCGATCGTGAATTCGACGACGAGAAGATCTTGGTGCAGCATCAGAAAGCGAAGCACTTCAAGTGCCACGTCTGCCACAAGAAGCTCTCAACCGCCAGCGGCATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCCAATGCAAAACCTGGCAGAGAGAGTACGGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATATCTTGGCTGCACATTATGGTGAAGAAGATGATGATGTTCCATCAAAGGCAGCCAAGGTTGATATTTCACAAAGTCAGCTTGTAGGTGGAATGAGGCCACCTCCTTTGGGTACAGGATATCCTCCGCGATCAGTCTTACCTACACTTCCACCCGTTTATAATCCAGCTGTACCCTTGCCACCGAATGCTTGGGTGGTTCCACCTCGACAGCCATGGTTTTCACAACCTCCAGCTGTTTCAGTTCCTCCTCCTGCCCCATACACTCAGCAGCCATTATTTCCTTTGCAGAATGTCAGGCCTCCAATGCCAGCAACTGCTCCGGCAGCAATGCAAACACAGATTGCTCCTCCTGGATTGCTTACATCTGCACCTGTCCCAGTTTCACAACCTTTATTCCCTGTTGTTGGAAACAACCATACAACGACTCAAAGTTCATATTCTGCCCCACCTCTTCCCTCAAGTGTTCCATCAGTTACTCCAGTGATGTCTGCCAATGTCCCTGTTGATACACATTTGAGTACCCACTCTTCAGTAACAAACAGTTACCAGGCTATAGGAGTTCCAGCAAGTAATTCACACTCTTATGCTTCTGGTCCAAATACTGGTGGTCCTTCAATTGGGCCTCCCCCAGTAATTGCAAACAAAGCTCCTGCTTCTCAACCTGCCACCAACGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTGCCAAAATATCAGGTGCATGATGAAAGTAGCCAGATGAGCTCCATTGACGCAGCCATCGATAAGAGGATACTTGAAAGCAGGCTGGCTGGTCGGATGGCATTTTAG 1104 0.4846 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEDDDVPSKAAKVDISQSQLVGGMRPPPLGTGYPPRSVLPTLPPVYNPAVPLPPNAWVVPPRQPWFSQPPAVSVPPPAPYTQQPLFPLQNVRPPMPATAPAAMQTQIAPPGLLTSAPVPVSQPLFPVVGNNHTTTQSSYSAPPLPSSVPSVTPVMSANVPVDTHLSTHSSVTNSYQAIGVPASNSHSYASGPNTGGPSIGPPPVIANKAPASQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3345 367 MobiDBLite consensus disorder prediction 282 307 - -
Pvu2g3345 367 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Pvu2g3345 367 SMART c2h2final6 36 59 IPR013087 -
Pvu2g3345 367 SMART c2h2final6 12 35 IPR013087 -
Pvu2g3345 367 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Pvu2g3345 367 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 367 - -
Pvu2g3345 367 PANTHER ZINC FINGER PROTEIN 207 1 367 - -
Pvu2g3345 367 Gene3D Classic Zinc Finger 1 66 - -
Pvu2g3345 367 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3345 1 347 C2H2 Transcription Factor Family AT1G30970 61.475 8.44e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g3345 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3345 - - gmx:100819009 647.891