Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3335 ATGGGGGGCGAGAATCTTTCACCCAAGGAAAAGAGTAGAGATTGGGTTGGAGTTCTTATGAACAGCAGCTTTGGTTATTGTGATTACCACCATGATCTTCGATCTAATGAGAAGAATGTCTTCTGCGTAGACTGTGCTCTTAGGATGTGTAGACACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTATCAGGATGTCTTCCGTCATGCCGAACTGCAGAAGTATTTTGATTGCTCAAAAATTCAGACTTATATATCCAATAATGAAAGGATTGTGCACCTCAAACCTCGCCCTTCAATCAACAAATCTAAATCTTCTGATCTAAGCCCTGATTCTAAATCCAAAGAACCCAGCATAAGACCGAAGTCTGGAGGAAAGTGTGAAGAATGTGGAAAACACTTGCAAGATGAACGCAACCGCTTCTGCTCCATTACATGCAAGATCGCAGTGCTTCCAGTGGAGACTGAAAACCAAAGTGCTAGAGGCATGATCACTCCAAAATCTGAAGGCATTGACTTCACAATGAATGATAACCATAATTCAGAACCAGAGTCATCTATCTCTGAAGTTGAGCCATATGGGTGGGTTGAAGTTGTGAATTTCAGAAAGCGCCCAAGGAAAAGCACCCCTCAGAGGCCTGTCTTTGTTTTCACTTCGTAG 681 0.4214 MGGENLSPKEKSRDWVGVLMNSSFGYCDYHHDLRSNEKNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSINKSKSSDLSPDSKSKEPSIRPKSGGKCEECGKHLQDERNRFCSITCKIAVLPVETENQSARGMITPKSEGIDFTMNDNHNSEPESSISEVEPYGWVEVVNFRKRPRKSTPQRPVFVFTS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3335 226 Pfam PLATZ transcription factor 67 155 IPR006734 -
Pvu2g3335 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 196 - -
Pvu2g3335 226 MobiDBLite consensus disorder prediction 102 133 - -
Pvu2g3335 226 MobiDBLite consensus disorder prediction 178 194 - -
Pvu2g3335 226 MobiDBLite consensus disorder prediction 115 133 - -
Pvu2g3335 226 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Pvu2g3335 226 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 196 - -
Pvu2g3335 226 SMART bboxneu5 22 65 IPR000315 GO:0008270
Pvu2g3335 226 MobiDBLite consensus disorder prediction 175 196 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu2g3335 PLATZ 5.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3335 - - gmx:100815813 419.083