Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g3332 | ATGTCAGCAAGTTCTTCATCATTGGCCATGTCTGCTTCTCTAACAAAGCATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTGACAACTTCATTAGCCACCTTCATCCAGCACTGCAAAGGAAGAACATAGAAGCATATATTGATGAGACACTACCCCGGGGCGAAGAAATTTCATCTGCACTGCTCTCTGCAATAGAAGAATCGAAGATTTATATCGTCGTTTTCTCCCAAAACTATGCATCTTCCACTTGGTGCTTGAATGAACTCACTAAGATACTTGATTGCAAGAAGAGATATGGAAGGGATGTCATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAACAAAGATACAAAGAAGCATTCGAAAAGCATGAGCAGCAGTTTAAGCACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTCACCGAAGCTGCTGGACTTTCAGGCTGGGATTCAAAAGTCACCAGGTCAGAACACACACTTGTTGAAGGAATTGTGGGAGATATTTTGAGAAAATTGAATCGTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTGAAAAAAATATTGAAGGAATTCAGTCCTTGTTGCATCTTGACTTACCGGATGTTCGGATCATAGGCATTTGTGGCATGGGAGGAATAGGAAAAAGTACAATTTGTGATCAAATATATCACAAATTGGAATTGCAGTTTGATTCCAGGAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAATAGACAGTATCAGAACAAAATATCTGTCTGAGCTCAAACGGACAAAGGTTCTCCTCATTCTTGATGATGTTACCGATTCAGCTCAACTTCAAAAATTAATAAGAGGGAGTGATAGTTTTGGGCAGGGCAGTAGAATCATTATCACCAGTAGAGACAGACAAGTGCTTAGGAATGCTGGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTAATGATTCTCAGAAGCTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGAAGAAATTGGTTACAGGGAACTGTCAAAAAAGGTGTTGACATATGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGATCATTGCTTTATGGCAGAACAAAAGAAGCATGGGAGAGTCAGTTGCAAAAGTTGAAAAAGGGCCAACATCTTGGTATTTTCAATGTATTAAAATTAAGTTATGATTGGCTGGAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGACGCCAGGAGATTGAGGTAGCAGAAAGACTTGATGACTTTGGTTTCTCTTCTAAGATTGGAATGGATATTCTCAAAGATAGGGGCCTAATATCTGTCATTGATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTAAAGAAATTGTTCATAAAGAGTGTCCTCAGCATCCTGGAAAACGCAGCCGATTGTTTAATGATGAGGAAATTTGTGAGGTCTTAAGAAAGAACAAGGGGTCAGATGCAATACAGTGTATATTACTAAATACCTGGGGTACGTGGAAAGTAAAAGAAGTTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTAGGATGCTTAGGCTCTACACGTTGGGATTGGAATCAAAAGTGTCTCCTGAATCATCTCTTGTAGGTCTGCCGGACACTCTAAAGATTCTATATTGGGACGATTTCCCTCAAAGATTTTGGCCTCCAAAGTTTTGCCCACAAAATCTAGTGACTCTCGAAATGCCACGCAACCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAAGTTGAAAAGGCTCAACCTGAGTCATTCTTCGAACCTTACTAGAATACCAGACCTTTCTACGTCACCAAATATTGAAGAAATAAAGCTGAGTTATTGTTCAAAGTTGATTGAAGTTCACTCTTCGATATTCCTCAGCAAGCTCAGTTGTTTATGTTTAGATCATTGTTATGATCTGAATAGTGTAAATATTCCCAACAACATTTTATCCACATTACCAGGATTGATTATTCTTTCCTGTTGTCGGAAGCTTAATATGTTTTCAACCAGTGAACCCAGATTCCCTCATATGAAACTGCGGCATAAACGTGGAAATATGATAGTTGAAGCGCAATGTGCATCCGGTGTTCATATTTTCCGAAGTTCCAGTGAAATTTTCTCAATTACTTTTGACAGATATAATGAAGAAGTGGCTAATAATACTCTATACTTACAATTTGAAGTGTCGGCAAATCTCAGAGGAGGTGTGCCCTTGAACTTTCAAAGTCTCAAGAACCTCTGTTACTTAGATCTCTCTGACTGTTCTTCCCTTACAATCTTTCCGTTTGACCTTTCTGATATGAAATTCCTAAAGCAACTTTCTCTCCGTGGTTGCTCAAAATTGGAATATTTACCCCAGATTCAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAACAACTGAGTTTGCGCAGTTGCTTCAATCTTCAGATTATTCCATCTTCCATTGGAACCCTCACCAGACTATGCAAGTTAGACCTTACCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAATTGAGGAAGTTTGATTTAGGTGGTTGCTCAAGGCTGAGGTCCTTCCCAGAGATCACGGAGCCGGCTCATACTTTTGCTCACATTAACTTAACATCTACGGCTGTTAAAGAATTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGGAGCTCCACAAATGCACTGATCTCGACTCACTTCCAAACTGCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGCCCCAAATTAACAGAAATCCCTAGACACATTGGTCGTTTGACGTCATTAATGAAACTTTCACTGCGTAATAGCGGAATCGTGAACCTTCCTGGGAGCATTGCTCATCTTTCAAGTTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTGAAACAACTCGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGCCAAATTCTCTTGTTCGAAACCTCTCAAATTCCGAAGAGGGTGTATTTAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGACCGACGATGCATATAGGTGTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCAATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGAGTGTGGTTTTTGGAGTGTTAGATACGTATGCTATGAATGGTAGATATGGTTCTTTTAGTTACAGCCTAACATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACAGCTATTTCAAATGGAATGGTGAAGAGAGATGTGTTGATAAAGATCACACATTCGTGTGGAAATTTAACTTGGAGTCCCTAAGGGCGAGCGGCATGAGCCTCAGGCTATGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCGTGTGATTATGACTTTGGGTGGCCAGATTACGAATCAGTTGTGAGAGAGTTGAAATCAGTTATCACAATAAAAGAATGCGGCATATGCCCTCTTTATACGAAAAAGAAAGATGATGAATATGGTGGTGCTGTTGAGATTGAAGAATCCAGTGGAAGCAATGTTGCACAGTCTTCAAGAGAAACAAGGGAAGATAGGAAGTGGAAGGCCGAAAGCTAG | 3906 | 0.403 | MSASSSSLAMSASLTKHDVFLSFRGEDTRDNFISHLHPALQRKNIEAYIDETLPRGEEISSALLSAIEESKIYIVVFSQNYASSTWCLNELTKILDCKKRYGRDVIPVFYKVDPSTIRKQEQRYKEAFEKHEQQFKHDMDKVQGWKDALTEAAGLSGWDSKVTRSEHTLVEGIVGDILRKLNRYSTSYDQGIIGIEKNIEGIQSLLHLDLPDVRIIGICGMGGIGKSTICDQIYHKLELQFDSRSLVLDVQEKIQRDGIDSIRTKYLSELKRTKVLLILDDVTDSAQLQKLIRGSDSFGQGSRIIITSRDRQVLRNAGADDIYEVKELNFNDSQKLFSLHAFKQKSSEEIGYRELSKKVLTYAKGIPLALQILGSLLYGRTKEAWESQLQKLKKGQHLGIFNVLKLSYDWLEEEEKNIFLDIACFYRGRQEIEVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVHKECPQHPGKRSRLFNDEEICEVLRKNKGSDAIQCILLNTWGTWKVKEVVVHAQSFEKMDNLRMLRLYTLGLESKVSPESSLVGLPDTLKILYWDDFPQRFWPPKFCPQNLVTLEMPRNHLEQLWEGDQNLPKLKRLNLSHSSNLTRIPDLSTSPNIEEIKLSYCSKLIEVHSSIFLSKLSCLCLDHCYDLNSVNIPNNILSTLPGLIILSCCRKLNMFSTSEPRFPHMKLRHKRGNMIVEAQCASGVHIFRSSSEIFSITFDRYNEEVANNTLYLQFEVSANLRGGVPLNFQSLKNLCYLDLSDCSSLTIFPFDLSDMKFLKQLSLRGCSKLEYLPQIQDTLEDLAVLILDDTAIQALPSSLCRLVGLQQLSLRSCFNLQIIPSSIGTLTRLCKLDLTHCNSLQTFPSTIFNLKLRKFDLGGCSRLRSFPEITEPAHTFAHINLTSTAVKELPSSFGNLVNLRSLELHKCTDLDSLPNCIVNLKLLSKLDCSGCPKLTEIPRHIGRLTSLMKLSLRNSGIVNLPGSIAHLSSLKSLDLSDCKKLECIPQIPPFLKQLVALDCPSIRRVMPNSLVRNLSNSEEGVFKFHFTNAQQLDSGGRANIEEDARLRMTDDAYRCVFFCFPGSAVPGWFNFRGKGHSVTINEDLSFCSDDRLTGFALSVVFGVLDTYAMNGRYGSFSYSLTFESDDDGTQIIPNNDVLNSYFKWNGEERCVDKDHTFVWKFNLESLRASGMSLRLCDARSFTFEISPCDYDFGWPDYESVVRELKSVITIKECGICPLYTKKKDDEYGGAVEIEESSGSNVAQSSRETREDRKWKAES* | 1302 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g3332 | 1301 | Gene3D | Ribonuclease Inhibitor | 915 | 1062 | IPR032675 | - | |
Pvu2g3332 | 1301 | Pfam | TIR domain | 16 | 187 | IPR000157 | GO:0007165 | |
Pvu2g3332 | 1301 | ProSiteProfiles | TIR domain profile. | 15 | 181 | IPR000157 | GO:0007165 | |
Pvu2g3332 | 1301 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 773 | 866 | IPR044974 | GO:0006952 | |
Pvu2g3332 | 1301 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 11 | 679 | IPR044974 | GO:0006952 | |
Pvu2g3332 | 1301 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 848 | 1061 | IPR044974 | GO:0006952 | |
Pvu2g3332 | 1301 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 182 | 422 | IPR027417 | - | |
Pvu2g3332 | 1301 | SUPERFAMILY | L domain-like | 757 | 1045 | - | - | |
Pvu2g3332 | 1301 | Pfam | NB-ARC domain | 198 | 396 | IPR002182 | GO:0043531 | |
Pvu2g3332 | 1301 | MobiDBLite | consensus disorder prediction | 1276 | 1301 | - | - | |
Pvu2g3332 | 1301 | Pfam | Leucine Rich Repeat | 589 | 608 | IPR011713 | - | |
Pvu2g3332 | 1301 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 158 | IPR035897 | - | |
Pvu2g3332 | 1301 | PRINTS | Disease resistance protein signature | 215 | 230 | - | - | |
Pvu2g3332 | 1301 | PRINTS | Disease resistance protein signature | 363 | 377 | - | - | |
Pvu2g3332 | 1301 | PRINTS | Disease resistance protein signature | 1008 | 1024 | - | - | |
Pvu2g3332 | 1301 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 11 | 679 | - | - | |
Pvu2g3332 | 1301 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 848 | 1061 | - | - | |
Pvu2g3332 | 1301 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 773 | 866 | - | - | |
Pvu2g3332 | 1301 | SUPERFAMILY | "Winged helix" DNA-binding domain | 400 | 503 | IPR036390 | - | |
Pvu2g3332 | 1301 | Gene3D | - | 327 | 412 | IPR042197 | - | |
Pvu2g3332 | 1301 | Gene3D | - | 14 | 186 | IPR035897 | - | |
Pvu2g3332 | 1301 | Gene3D | - | 187 | 322 | IPR027417 | - | |
Pvu2g3332 | 1301 | Gene3D | Ribonuclease Inhibitor | 464 | 711 | IPR032675 | - | |
Pvu2g3332 | 1301 | SMART | AAA_5 | 212 | 328 | IPR003593 | - | |
Pvu2g3332 | 1301 | SUPERFAMILY | RNI-like | 568 | 829 | - | - | |
Pvu2g3332 | 1301 | Pfam | C-JID domain | 1103 | 1265 | IPR045344 | - | |
Pvu2g3332 | 1301 | Gene3D | Ribonuclease Inhibitor | 751 | 914 | IPR032675 | - | |
Pvu2g3332 | 1301 | SMART | till_3 | 16 | 155 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g3332 | Pvu-Chr2 | 48258121 | 48264877 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g3332 | 775 | 945 | WRKY Transcription Factor Family | AT4G12020 | 33.333 | 1.01e-14 | 77.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g3332 | - | - | pvu:PHAVU_002G323800g | 2581.59 |