Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3332 ATGTCAGCAAGTTCTTCATCATTGGCCATGTCTGCTTCTCTAACAAAGCATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTGACAACTTCATTAGCCACCTTCATCCAGCACTGCAAAGGAAGAACATAGAAGCATATATTGATGAGACACTACCCCGGGGCGAAGAAATTTCATCTGCACTGCTCTCTGCAATAGAAGAATCGAAGATTTATATCGTCGTTTTCTCCCAAAACTATGCATCTTCCACTTGGTGCTTGAATGAACTCACTAAGATACTTGATTGCAAGAAGAGATATGGAAGGGATGTCATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAACAAAGATACAAAGAAGCATTCGAAAAGCATGAGCAGCAGTTTAAGCACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTCACCGAAGCTGCTGGACTTTCAGGCTGGGATTCAAAAGTCACCAGGTCAGAACACACACTTGTTGAAGGAATTGTGGGAGATATTTTGAGAAAATTGAATCGTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTGAAAAAAATATTGAAGGAATTCAGTCCTTGTTGCATCTTGACTTACCGGATGTTCGGATCATAGGCATTTGTGGCATGGGAGGAATAGGAAAAAGTACAATTTGTGATCAAATATATCACAAATTGGAATTGCAGTTTGATTCCAGGAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAATAGACAGTATCAGAACAAAATATCTGTCTGAGCTCAAACGGACAAAGGTTCTCCTCATTCTTGATGATGTTACCGATTCAGCTCAACTTCAAAAATTAATAAGAGGGAGTGATAGTTTTGGGCAGGGCAGTAGAATCATTATCACCAGTAGAGACAGACAAGTGCTTAGGAATGCTGGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTAATGATTCTCAGAAGCTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGAAGAAATTGGTTACAGGGAACTGTCAAAAAAGGTGTTGACATATGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGATCATTGCTTTATGGCAGAACAAAAGAAGCATGGGAGAGTCAGTTGCAAAAGTTGAAAAAGGGCCAACATCTTGGTATTTTCAATGTATTAAAATTAAGTTATGATTGGCTGGAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGACGCCAGGAGATTGAGGTAGCAGAAAGACTTGATGACTTTGGTTTCTCTTCTAAGATTGGAATGGATATTCTCAAAGATAGGGGCCTAATATCTGTCATTGATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTAAAGAAATTGTTCATAAAGAGTGTCCTCAGCATCCTGGAAAACGCAGCCGATTGTTTAATGATGAGGAAATTTGTGAGGTCTTAAGAAAGAACAAGGGGTCAGATGCAATACAGTGTATATTACTAAATACCTGGGGTACGTGGAAAGTAAAAGAAGTTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTAGGATGCTTAGGCTCTACACGTTGGGATTGGAATCAAAAGTGTCTCCTGAATCATCTCTTGTAGGTCTGCCGGACACTCTAAAGATTCTATATTGGGACGATTTCCCTCAAAGATTTTGGCCTCCAAAGTTTTGCCCACAAAATCTAGTGACTCTCGAAATGCCACGCAACCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAAGTTGAAAAGGCTCAACCTGAGTCATTCTTCGAACCTTACTAGAATACCAGACCTTTCTACGTCACCAAATATTGAAGAAATAAAGCTGAGTTATTGTTCAAAGTTGATTGAAGTTCACTCTTCGATATTCCTCAGCAAGCTCAGTTGTTTATGTTTAGATCATTGTTATGATCTGAATAGTGTAAATATTCCCAACAACATTTTATCCACATTACCAGGATTGATTATTCTTTCCTGTTGTCGGAAGCTTAATATGTTTTCAACCAGTGAACCCAGATTCCCTCATATGAAACTGCGGCATAAACGTGGAAATATGATAGTTGAAGCGCAATGTGCATCCGGTGTTCATATTTTCCGAAGTTCCAGTGAAATTTTCTCAATTACTTTTGACAGATATAATGAAGAAGTGGCTAATAATACTCTATACTTACAATTTGAAGTGTCGGCAAATCTCAGAGGAGGTGTGCCCTTGAACTTTCAAAGTCTCAAGAACCTCTGTTACTTAGATCTCTCTGACTGTTCTTCCCTTACAATCTTTCCGTTTGACCTTTCTGATATGAAATTCCTAAAGCAACTTTCTCTCCGTGGTTGCTCAAAATTGGAATATTTACCCCAGATTCAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAACAACTGAGTTTGCGCAGTTGCTTCAATCTTCAGATTATTCCATCTTCCATTGGAACCCTCACCAGACTATGCAAGTTAGACCTTACCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAATTGAGGAAGTTTGATTTAGGTGGTTGCTCAAGGCTGAGGTCCTTCCCAGAGATCACGGAGCCGGCTCATACTTTTGCTCACATTAACTTAACATCTACGGCTGTTAAAGAATTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGGAGCTCCACAAATGCACTGATCTCGACTCACTTCCAAACTGCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGCCCCAAATTAACAGAAATCCCTAGACACATTGGTCGTTTGACGTCATTAATGAAACTTTCACTGCGTAATAGCGGAATCGTGAACCTTCCTGGGAGCATTGCTCATCTTTCAAGTTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTGAAACAACTCGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGCCAAATTCTCTTGTTCGAAACCTCTCAAATTCCGAAGAGGGTGTATTTAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGACCGACGATGCATATAGGTGTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCAATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGAGTGTGGTTTTTGGAGTGTTAGATACGTATGCTATGAATGGTAGATATGGTTCTTTTAGTTACAGCCTAACATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACAGCTATTTCAAATGGAATGGTGAAGAGAGATGTGTTGATAAAGATCACACATTCGTGTGGAAATTTAACTTGGAGTCCCTAAGGGCGAGCGGCATGAGCCTCAGGCTATGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCGTGTGATTATGACTTTGGGTGGCCAGATTACGAATCAGTTGTGAGAGAGTTGAAATCAGTTATCACAATAAAAGAATGCGGCATATGCCCTCTTTATACGAAAAAGAAAGATGATGAATATGGTGGTGCTGTTGAGATTGAAGAATCCAGTGGAAGCAATGTTGCACAGTCTTCAAGAGAAACAAGGGAAGATAGGAAGTGGAAGGCCGAAAGCTAG 3906 0.403 MSASSSSLAMSASLTKHDVFLSFRGEDTRDNFISHLHPALQRKNIEAYIDETLPRGEEISSALLSAIEESKIYIVVFSQNYASSTWCLNELTKILDCKKRYGRDVIPVFYKVDPSTIRKQEQRYKEAFEKHEQQFKHDMDKVQGWKDALTEAAGLSGWDSKVTRSEHTLVEGIVGDILRKLNRYSTSYDQGIIGIEKNIEGIQSLLHLDLPDVRIIGICGMGGIGKSTICDQIYHKLELQFDSRSLVLDVQEKIQRDGIDSIRTKYLSELKRTKVLLILDDVTDSAQLQKLIRGSDSFGQGSRIIITSRDRQVLRNAGADDIYEVKELNFNDSQKLFSLHAFKQKSSEEIGYRELSKKVLTYAKGIPLALQILGSLLYGRTKEAWESQLQKLKKGQHLGIFNVLKLSYDWLEEEEKNIFLDIACFYRGRQEIEVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVHKECPQHPGKRSRLFNDEEICEVLRKNKGSDAIQCILLNTWGTWKVKEVVVHAQSFEKMDNLRMLRLYTLGLESKVSPESSLVGLPDTLKILYWDDFPQRFWPPKFCPQNLVTLEMPRNHLEQLWEGDQNLPKLKRLNLSHSSNLTRIPDLSTSPNIEEIKLSYCSKLIEVHSSIFLSKLSCLCLDHCYDLNSVNIPNNILSTLPGLIILSCCRKLNMFSTSEPRFPHMKLRHKRGNMIVEAQCASGVHIFRSSSEIFSITFDRYNEEVANNTLYLQFEVSANLRGGVPLNFQSLKNLCYLDLSDCSSLTIFPFDLSDMKFLKQLSLRGCSKLEYLPQIQDTLEDLAVLILDDTAIQALPSSLCRLVGLQQLSLRSCFNLQIIPSSIGTLTRLCKLDLTHCNSLQTFPSTIFNLKLRKFDLGGCSRLRSFPEITEPAHTFAHINLTSTAVKELPSSFGNLVNLRSLELHKCTDLDSLPNCIVNLKLLSKLDCSGCPKLTEIPRHIGRLTSLMKLSLRNSGIVNLPGSIAHLSSLKSLDLSDCKKLECIPQIPPFLKQLVALDCPSIRRVMPNSLVRNLSNSEEGVFKFHFTNAQQLDSGGRANIEEDARLRMTDDAYRCVFFCFPGSAVPGWFNFRGKGHSVTINEDLSFCSDDRLTGFALSVVFGVLDTYAMNGRYGSFSYSLTFESDDDGTQIIPNNDVLNSYFKWNGEERCVDKDHTFVWKFNLESLRASGMSLRLCDARSFTFEISPCDYDFGWPDYESVVRELKSVITIKECGICPLYTKKKDDEYGGAVEIEESSGSNVAQSSRETREDRKWKAES* 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3332 1301 Gene3D Ribonuclease Inhibitor 915 1062 IPR032675 -
Pvu2g3332 1301 Pfam TIR domain 16 187 IPR000157 GO:0007165
Pvu2g3332 1301 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pvu2g3332 1301 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 773 866 IPR044974 GO:0006952
Pvu2g3332 1301 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 679 IPR044974 GO:0006952
Pvu2g3332 1301 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 848 1061 IPR044974 GO:0006952
Pvu2g3332 1301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 422 IPR027417 -
Pvu2g3332 1301 SUPERFAMILY L domain-like 757 1045 - -
Pvu2g3332 1301 Pfam NB-ARC domain 198 396 IPR002182 GO:0043531
Pvu2g3332 1301 MobiDBLite consensus disorder prediction 1276 1301 - -
Pvu2g3332 1301 Pfam Leucine Rich Repeat 589 608 IPR011713 -
Pvu2g3332 1301 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Pvu2g3332 1301 PRINTS Disease resistance protein signature 215 230 - -
Pvu2g3332 1301 PRINTS Disease resistance protein signature 363 377 - -
Pvu2g3332 1301 PRINTS Disease resistance protein signature 1008 1024 - -
Pvu2g3332 1301 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 679 - -
Pvu2g3332 1301 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 848 1061 - -
Pvu2g3332 1301 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 773 866 - -
Pvu2g3332 1301 SUPERFAMILY "Winged helix" DNA-binding domain 400 503 IPR036390 -
Pvu2g3332 1301 Gene3D - 327 412 IPR042197 -
Pvu2g3332 1301 Gene3D - 14 186 IPR035897 -
Pvu2g3332 1301 Gene3D - 187 322 IPR027417 -
Pvu2g3332 1301 Gene3D Ribonuclease Inhibitor 464 711 IPR032675 -
Pvu2g3332 1301 SMART AAA_5 212 328 IPR003593 -
Pvu2g3332 1301 SUPERFAMILY RNI-like 568 829 - -
Pvu2g3332 1301 Pfam C-JID domain 1103 1265 IPR045344 -
Pvu2g3332 1301 Gene3D Ribonuclease Inhibitor 751 914 IPR032675 -
Pvu2g3332 1301 SMART till_3 16 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3332 Pvu-Chr2 48258121 48264877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3332 775 945 WRKY Transcription Factor Family AT4G12020 33.333 1.01e-14 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3332 - - pvu:PHAVU_002G323800g 2581.59