Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3328 AAGAACAAGGGGTCAGATGCAATACAGTGTATATTACTACATACGAACAAAGTAAAAGATGCTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTATGATGCTTATGGTCTACATGCCTATATTCATATCAAATGTGTCTCTTGAATCATCTCTTGTAGGTCTGCCAGACACTCTAAAGTTTCTTTATTGGAACGGCTGCCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCAAACTTGAAAAGGCTTGACCTGAGTGGTTCTCGGAAACTTACTAGAATACCAGACTTTTCTCTCTTACCAAATATTGAAGAAATAATTCTGAGTTATTGTGGAAAGTTGATTAAAGTTCACTCTTCGATATTACTCAGCAAGCTCAGTTATTTATGTTTAGATAATTGTTATGATCTGAATAGTATAAATATTCCCAGCAACATTTTATCCACATTACAAGGATGGATTAATATTTCCTGTTGTGGGAAGCTTAATATGTTTTCAACCAGTGAACCCAGATTTCGTCATGTGAAACTGGAGCGTCACAAGATACCCACATCAGAAACTGGGGCATCAACATATAATGAAGAAGAAGAAGTGGCTAATAATACTATATACTTAGAAGTGTTGACAAAATTCATGAAAGGTGTGCCCTTACACTTTAGTTGCAAGAAGCTCTGTCATTTAGATCTCTCTTACTGTTCTTCCCTTACAATCTTTCCATTTGACCTTTCTGATATGAAATTCCTAAAGCAACTTTCTCTCCGTGGTTGCTCAAAATTGGAAAATTTACCCCAGATTCAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGCCACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGTTGCCTTCCTCATTTTGCAATTTCGTTAATCTTCGATCCTTGGAGCTTCAGAAATACACTGATATCGACTTCTCTCTAAATTGTTCGGGGTGCTCCAAATTAACAGAAATCCCAAGACACATTGGTCGTTTGACGTTATTAATGGAACTATCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCACAGATTCCACCATTTCTAAAGCAACTCGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGCCAAATTCTCTTGTTCGAAACCTCTCAAATTCCAAAGAGGGTGTATTCAAATTTCATTTCACCAATGCTCAGCAACTGGATTCAGGTGGTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGACCGACGATAGATATAGGTCTGTGTTCTTCTGTTTTCCAGGGACTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGATGTGTTAAACAGCTATTTCGAATGGTGAAGAGAGATGTGTTGATCAAGATCACACATTCGTGTGGAAATTTAACTTGGAGTTCCTAA 1548 0.3921 KNKGSDAIQCILLHTNKVKDAVVHAQSFEKMDNLMMLMVYMPIFISNVSLESSLVGLPDTLKFLYWNGCHLEQLWEGDQNLPNLKRLDLSGSRKLTRIPDFSLLPNIEEIILSYCGKLIKVHSSILLSKLSYLCLDNCYDLNSINIPSNILSTLQGWINISCCGKLNMFSTSEPRFRHVKLERHKIPTSETGASTYNEEEEVANNTIYLEVLTKFMKGVPLHFSCKKLCHLDLSYCSSLTIFPFDLSDMKFLKQLSLRGCSKLENLPQIQDTLEDLAVLILDATAIQALPSSLCRLLPSSFCNFVNLRSLELQKYTDIDFSLNCSGCSKLTEIPRHIGRLTLLMELSLRDSGIVNLPESIAHLSSLKSLDLSDCKKLECIPQIPPFLKQLVALDCPSIRRVMPNSLVRNLSNSKEGVFKFHFTNAQQLDSGGRANIEEDARLRMTDDRYRSVFFCFPGTAVPGWFHFRGKGHSVTINEDLSFCSDDRCVKQLFRMVKRDVLIKITHSCGNLTWSS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3328 515 Gene3D Ribonuclease Inhibitor 9 186 IPR032675 -
Pvu2g3328 515 Gene3D Ribonuclease Inhibitor 224 429 IPR032675 -
Pvu2g3328 515 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 70 415 - -
Pvu2g3328 515 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 50 155 - -
Pvu2g3328 515 SUPERFAMILY L domain-like 46 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3328 Pvu-Chr2 48239882 48244462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3328 6 312 WRKY Transcription Factor Family AT5G45050 26.844 9.04e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3328 - - pvu:PHAVU_002G3235001 1028.47