Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3327 ATGGGAGGAATAGGAAAAACTACAATTTGTGATCAAATATATCACAAATTGGAATTGCAGTTTGATTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACATGATCCGCTTCTTAAGGCAACTAACCAACTAACGTCTCAACTTCAAAAATTAATAAGAGGGAGTGATAGTTTTGGGCAGGGCAGTAGAATCATTATCACCAGTAGAGACAAACAAGTGCTTAAGAATGCTAGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTGATGATTCTCAGAAACTTTTTAGTTTACTTGCTTTTAAACAAAAATCTTCAGAAGAAATTGCTTACAGGGAACTGTCAGAAAAGGTGTTGAGATATGCAAAAGGGATTCCATTAGCTCTCCAGATTTTGGGGTCATTGCTTTATGGAAGAACAAGAGAAGCATGGGAGAGTCAGTTGCAAAAGTTGGAAAAGGGCCAACATCTTGGTATTTTCAATGTATTAAAATTAAGTTATGATGGGCTCGAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATATAGGTCACAAGAGATTGTGGGGCCTAATATCTGTCTTTCATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTAAAGAAATTGTTCGTAAAGAGTGTCCTCAGCATCCTGGAAAACGCAGCCGATTAAAGAACAAGGGGTCAGATGCAATAGAGTGTATATCACTATCTACTTCAATAGAGTGTATATCACTATCTACTTTCAAAGTAAAAGAAGTTGTAGTACATGCACAAAGTTTCGAAAAGATGAACAATCTTAGGGTGCTTAGGCTCTACACGTGGGGATTGGAATTAAAAGTGTCTTTTGAATCACCTCTTGTGGATATGCCAGACACTCTAAAGATTCTTTATTGGACACATTTCCCTCAAAGATTTTGGCCTCCAAACTTTTGCCCACAAAATCTAGTGACCCTCGAAATGCCATTCTGCCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAACTTGAAAAGGCTCGACCTGGTTAAATCTTGGGAACTTACTAGAATACCAGACCTTTCTCTGTCACCGAATATTGAAGAAATAAAGCTGAGTTATTGTTCAAAGTTGATTGAAATTCAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGCCACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGATAGGGCTTGAAGAACTGAGTTTGCGCAGTTGCTTCAATCTTCAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTACACCTCACCCGCTGTAATTCACTTCAGACTTTTCCAAGCAGCATTTTCAATTTGAAATTGAGCAAGCTTGATTTGTGTGGTTGCTCAAGCCTGAGTACCTTCCCAGATATCACGGAGCGGGCTCCTACTTTTGCTCGCATTGACTTATCATATACGGCTGTTAAAGTACTGCCTTCCTCATTTGCCAATTTCGTTAATCTTCGATCCCTGGAGCTCCGCAAATGCACTGATCTCGACACCATTTTCAATTTGAAATTGAGGAAGCTTGATTTGGGTGGTTGCTCAAGGCTGAGGACCTTCCCAGAGATCATGAAGCCGGCTCATACTTTTGCTCATATTGACTTGACATGTACGGCTGTTAAAGAACTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGGAACTCCAAGAGTGCACTTATCTCGAGTCACTTCCAAACTCCATTGTTAATATGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAAGACACATCGGTCGCTTGACGTCATTAATGGAACTGTCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCCTGAAATCACTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATTCCACCGATTCCACCATTTCTAGAACAACTCGAGGCATTGGATTGCCCATCCATTAGAAGAGTGATGTCAAATTCTCTTGTTCCAAACTTGTCAAATTCCAAAGAGGGTGTCTTCAAATATCATTTCACCAATGCTCAACAACTGGATTCAGGTGCTCGTGCTAACATCGAGGAGGATGCAAGGCTTAGGATGATCGACGATACATATAGGTGTGTGTTGTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCAATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTAGCTTTTGGAGTGTTAGATATTAAAGGTGGATATGGTTCTTTTCGTTACAGCCTAAAATTTGAATATGATGATGGCACACAGATCATTCCATATAAGGGTGTGTTAAATAGCTATTTCAAATGGGATGGTGAAGGGACATTCGTGTGGAAATTTAACTTGGAGTCCCTAATGGCGAGCGGCATGAGCCTTAGGCTGTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCGTATGATCCCTTTCTGCGGCCAAATCGGCCAGATTACGAATCAGTTGAGAGAGAGTTGAAATCAGGTATCAGAATAAAAGAATGCGGCATATGCCCTCTTTATACGAAAAAGAAAGATGATAAATATGGTGGTGCTGTTGACTATTCTGCATCAGAAAATGACATTGAAGAATTCAGTGGAAGCAATGTTGCACACTCTTCAGGAGAAACAGGGGAAGATAGGAAGAGGAACGCCGAAAGCTACCCAGTCAACTAG 2808 0.4099 MGGIGKTTICDQIYHKLELQFDSSSLVLDVQEKIHDPLLKATNQLTSQLQKLIRGSDSFGQGSRIIITSRDKQVLKNARADDIYEVKELNFDDSQKLFSLLAFKQKSSEEIAYRELSEKVLRYAKGIPLALQILGSLLYGRTREAWESQLQKLEKGQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYIGHKRLWGLISVFHGRIVMHDLIQEMGKEIVRKECPQHPGKRSRLKNKGSDAIECISLSTSIECISLSTFKVKEVVVHAQSFEKMNNLRVLRLYTWGLELKVSFESPLVDMPDTLKILYWTHFPQRFWPPNFCPQNLVTLEMPFCHLEQLWEGDQNLPNLKRLDLVKSWELTRIPDLSLSPNIEEIKLSYCSKLIEIQDTLEDLAVLILDATAIQALPSSLCRLIGLEELSLRSCFNLQIIPSSIGSLTRLCKLHLTRCNSLQTFPSSIFNLKLSKLDLCGCSSLSTFPDITERAPTFARIDLSYTAVKVLPSSFANFVNLRSLELRKCTDLDTIFNLKLRKLDLGGCSRLRTFPEIMKPAHTFAHIDLTCTAVKELPSSFGNLVNLRSLELQECTYLESLPNSIVNMKLLSKLDCSGCAKLTEIPRHIGRLTSLMELSLRDSGIVNLPESIAHLSSLKSLDLSDCKKLECIPPIPPFLEQLEALDCPSIRRVMSNSLVPNLSNSKEGVFKYHFTNAQQLDSGARANIEEDARLRMIDDTYRCVLFCFPGSAVPGWFNFRGKGHSVTINEDLSFCSDDRLTGFALCVAFGVLDIKGGYGSFRYSLKFEYDDGTQIIPYKGVLNSYFKWDGEGTFVWKFNLESLMASGMSLRLCDARSFTFEISPYDPFLRPNRPDYESVERELKSGIRIKECGICPLYTKKKDDKYGGAVDYSASENDIEEFSGSNVAHSSGETGEDRKRNAESYPVN* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3327 935 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 47 194 - -
Pvu2g3327 935 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 412 530 - -
Pvu2g3327 935 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 202 404 - -
Pvu2g3327 935 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 557 661 - -
Pvu2g3327 935 SUPERFAMILY L domain-like 205 672 - -
Pvu2g3327 935 MobiDBLite consensus disorder prediction 908 935 - -
Pvu2g3327 935 MobiDBLite consensus disorder prediction 919 935 - -
Pvu2g3327 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 183 IPR027417 -
Pvu2g3327 935 Gene3D - 88 173 IPR042197 -
Pvu2g3327 935 Gene3D Ribonuclease Inhibitor 391 483 IPR032675 -
Pvu2g3327 935 Gene3D Ribonuclease Inhibitor 232 390 IPR032675 -
Pvu2g3327 935 Gene3D Ribonuclease Inhibitor 484 684 IPR032675 -
Pvu2g3327 935 Pfam C-JID domain 735 888 IPR045344 -
Pvu2g3327 935 Pfam NB-ARC domain 50 157 IPR002182 GO:0043531
Pvu2g3327 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 194 IPR044974 GO:0006952
Pvu2g3327 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 412 530 IPR044974 GO:0006952
Pvu2g3327 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 202 404 IPR044974 GO:0006952
Pvu2g3327 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 557 661 IPR044974 GO:0006952
Pvu2g3327 935 Gene3D - 1 61 IPR027417 -
Pvu2g3327 935 PRINTS Disease resistance protein signature 124 138 - -
Pvu2g3327 935 PRINTS Disease resistance protein signature 640 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3327 Pvu-Chr2 48220893 48229984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3327 474 673 WRKY Transcription Factor Family AT4G12020 30.932 6.66e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3327 - - pvu:PHAVU_002G323400g 1872.83