Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3326 ATGTCTGCTTCTTTAACAAAGCATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTGACAACTTCATTAGTCACCTTTATGCAGCGCTGCAAAGGAAGAACATTCAAGCATATATTGATTACAGATTACTCAGGGGCCAAGAAATTTCACCTGTACTCCTCTCTGCAATAGAAGAATCAAAGATTTATGTCATCGTTTTCTCCAAAAACTATGCATCTTCCACATGGTGCTTGGATGAACTCACTAAGATACTTGATTGCAAGAAGAGATATGGAAGGGATGTGATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAAGAAAGATACAAAGAAGCATTCAATGAGCATGAGCAGCACTTTAAGCACGACACAGTGCAAGGATGGAAGGATGCTCTCACCGAAGCTGCTGGACTTGCAGGCTGGGATTCAAAAGTCACCAGGCCAGAACACGCACTTGTTGAAGAAATTGTGGAAGATATTTTGAGAAAATTGAATCGTTATTCCGCCAGTTATGATCAAGGAATCATCGGCATTGAAAAAAATATTGAAGGAATTCAGTCCTTGTTGCATCTTGAGTCAACGGATGTTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATTTGTGATCAAATATATCAGAAATTGGCATTGCAGTTTGATTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAATAGACGGTATCAGAACAAAATATCAGTCTGAGCTTCTAAAGGAAGAGAAATCCTCTTATTTACCATATTACAATGAAAGGCTCAAACGGACAAAGGTTCTCCTCATTCTTGATGATGTTACCGATTCAACTCAACTTCAAAAATTAATAGGTGGGAGTGATAGTTTTGGGCAGGGCAGTAGAATCATTATGACCAGTAGAGACAGACAAGTGCTTAAGAATGCTGGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTTATGATTCTCTGAAACTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGAAGGAATTGCTTACATGGACCTGTCAGTAAAGGTGTTGAGATATGCAAAAGGAATTCCGTTAGCTCTCCAGATTTTGGGGTCATTGCTTTATGGCAGAACAAGAGAAGCATGGGAGAGTCAGTTGCAAAAGTTGGAAAACGGCCAAGATCTTGGAACTTTCGACGTATTAAAATTAAGTTATTATGGGCTCAAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGGCAAGAGGAGACTGTGGTAGCAGAAACACTTGATGACTGTGGTTTCTCTTCTAAGATTGGAATGGATATTCTCAAAGATAGGGGTCTAATCTCTGTCTTTGATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTAAAGAAATTGTTCGTAAAGAGTGTCCTCAGCATCCTGGAAAACGCAGCCGATTGTTTAATGATGAGGAAATTTGTGAGGTTTTAAGAAAGAACAAGATGCAATACAGTGTATATCAATATCATACGAACAAAGTAAAAGATGCTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTATGATGCTTATGGTCTACATGCCTAGATTGAATTCAAAAGTGTCTCTTGAATCATCTCTTGTAGGTCTGCCGGACACTCTAAAGTTTCTTTATTGGAACGGTTTCCTTCAAAGATTCTGGCCTCCAAACTTTTGCCCACAAAATCTAGTGATCCTCGAAATGCCATACTGCGATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAACTTGAAAAGGCTCGACCTGACACGTTCTTGGAAACTTGCTAGAATACCAGACCTTTCTATGTCACCAAATATTGAAAAAATAATTCTGAGTTATTGTAAAAAGTTGATTGAAATTCACTCTTCGATATTCCTCAGCAAACTCAGTTGTTTATGTTTAGATCATTGTGATGATCTGAATAGTGTGCCCTTAAACTTTCAAAGTCTCAAGAACCTCTGTTACTTAGATCTCTCTGACTGTTCTTCCCTTACAATCTTTCCGTTTGACCTTTCTGATATGAAATTCCTAAAGCAACTTTGTCTCAGTGGTTGCTCAAAACTGGAAAATTTACCCGAGATTCAGGACACGTTGGAAGATCTAGCGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAACAACTGAACCTTGCCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAACCTTGATTTGCGTGGTTGCTCAAGGCTGAGGACCTTCCCAGAGATCACGGAGTCGGCTCATACTTTTGCTCACATTAACTTAACATCTACGACTGTTAAAGAACTGCCTTCCTCATTTGCCAATTTCGTTAATCTTCGTTCCCTGGAGCTCCGCAAATGCACTGATCTCGAGTCACTTCCAAACTGCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAAGGCACATTGGTCGTTTGACGTCATTAATGGAACTGTCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCGAGCTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCACCGATTCCACCATTTCTAAAACAACTCGTGGCATTGGATTGCCCATCCATTAGAAAAGTGATGTCAAATTCTCTTGTTCGGAACCTCTCAAATTCCAAAGAGGGTGTATTCAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATTGAGAAGGATGCAAGGCTTAGGATGACCGACGATGCATATAGGTCTGTGTTCTTCTGTTATCCAGGGAGTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTTTGCAGCGATAATAGGCTCACTGGTTTCTCTTTGTGCGTGGTTTTTGAAGTGTTAGATACGAATGATATTAAAGGTAGATATAGTTCTTTTGGTTACAGCCTAAAATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTAAACTTGACGGATGCAGGCAGATTTCTTGATAAAGATCACACATTTGTGTGGAAATTTAACTTGGAGTCCCTAAGGGCAAGCGGCATGAGCCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGCCATTGGTGGCCCGATATCAGAGTAAAAGAATGCGGCATATGCCCTCTTTATTCCAAAAAGAAAGATGATGAATATGGTGGTGCTGTTCACATTGAATAA 3420 0.4 MSASLTKHDVFLSFRGEDTRDNFISHLYAALQRKNIQAYIDYRLLRGQEISPVLLSAIEESKIYVIVFSKNYASSTWCLDELTKILDCKKRYGRDVIPVFYKVDPSTIRKQEERYKEAFNEHEQHFKHDTVQGWKDALTEAAGLAGWDSKVTRPEHALVEEIVEDILRKLNRYSASYDQGIIGIEKNIEGIQSLLHLESTDVRIIGICGMGGIGKTTICDQIYQKLALQFDSSSLVLDVQEKIQRDGIDGIRTKYQSELLKEEKSSYLPYYNERLKRTKVLLILDDVTDSTQLQKLIGGSDSFGQGSRIIMTSRDRQVLKNAGADDIYEVKELNFYDSLKLFSLHAFKQKSSEGIAYMDLSVKVLRYAKGIPLALQILGSLLYGRTREAWESQLQKLENGQDLGTFDVLKLSYYGLKEEEKNIFLDIACFYRGQEETVVAETLDDCGFSSKIGMDILKDRGLISVFDGRIVMHDLIQEMGKEIVRKECPQHPGKRSRLFNDEEICEVLRKNKMQYSVYQYHTNKVKDAVVHAQSFEKMDNLMMLMVYMPRLNSKVSLESSLVGLPDTLKFLYWNGFLQRFWPPNFCPQNLVILEMPYCDLEQLWEGDQNLPNLKRLDLTRSWKLARIPDLSMSPNIEKIILSYCKKLIEIHSSIFLSKLSCLCLDHCDDLNSVPLNFQSLKNLCYLDLSDCSSLTIFPFDLSDMKFLKQLCLSGCSKLENLPEIQDTLEDLAVLILDDTAIQALPSSLCRLVGLQQLNLAHCNSLQTFPSTIFNLKLRNLDLRGCSRLRTFPEITESAHTFAHINLTSTTVKELPSSFANFVNLRSLELRKCTDLESLPNCIVNLKLLSKLDCSGCAKLTEIPRHIGRLTSLMELSLRDSGIVNLPESIAHLSSLKSLDLSDCKKLECIPPIPPFLKQLVALDCPSIRKVMSNSLVRNLSNSKEGVFKFHFTNAQQLDSGGRANIEKDARLRMTDDAYRSVFFCYPGSAVPGWFHFRGKGHSVTINEDLSFCSDNRLTGFSLCVVFEVLDTNDIKGRYSSFGYSLKFESDDDGTQIIPNNDVLNLTDAGRFLDKDHTFVWKFNLESLRASGMSLRLCDARSFTFEISHWWPDIRVKECGICPLYSKKKDDEYGGAVHIE* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3326 1139 SUPERFAMILY RNI-like 529 723 - -
Pvu2g3326 1139 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 147 IPR035897 -
Pvu2g3326 1139 Pfam Leucine Rich Repeat 589 608 IPR011713 -
Pvu2g3326 1139 Pfam NB-ARC domain 186 400 IPR002182 GO:0043531
Pvu2g3326 1139 Gene3D - 5 174 IPR035897 -
Pvu2g3326 1139 SUPERFAMILY L domain-like 670 929 - -
Pvu2g3326 1139 Pfam C-JID domain 985 1127 IPR045344 -
Pvu2g3326 1139 Gene3D - 175 328 IPR027417 -
Pvu2g3326 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 707 IPR044974 GO:0006952
Pvu2g3326 1139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 811 911 IPR044974 GO:0006952
Pvu2g3326 1139 SMART AAA_5 201 333 IPR003593 -
Pvu2g3326 1139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 427 IPR027417 -
Pvu2g3326 1139 Gene3D - 333 417 IPR042197 -
Pvu2g3326 1139 Pfam TIR domain 7 176 IPR000157 GO:0007165
Pvu2g3326 1139 Gene3D Ribonuclease Inhibitor 728 938 IPR032675 -
Pvu2g3326 1139 Gene3D Ribonuclease Inhibitor 657 727 IPR032675 -
Pvu2g3326 1139 PRINTS Disease resistance protein signature 204 219 - -
Pvu2g3326 1139 PRINTS Disease resistance protein signature 274 288 - -
Pvu2g3326 1139 PRINTS Disease resistance protein signature 368 382 - -
Pvu2g3326 1139 PRINTS Disease resistance protein signature 890 906 - -
Pvu2g3326 1139 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 707 - -
Pvu2g3326 1139 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 811 911 - -
Pvu2g3326 1139 SMART till_3 7 144 IPR000157 GO:0007165
Pvu2g3326 1139 SUPERFAMILY "Winged helix" DNA-binding domain 407 508 IPR036390 -
Pvu2g3326 1139 ProSiteProfiles TIR domain profile. 6 170 IPR000157 GO:0007165
Pvu2g3326 1139 Gene3D Ribonuclease Inhibitor 517 656 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3326 Pvu-Chr2 48210700 48217094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3326 754 923 WRKY Transcription Factor Family AT4G12020 29.825 1.02e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3326 - - pvu:PHAVU_002G323300g 2250.32