Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3325 ATGTCAGGAAGTTCTTCATCATTCCCCGTGTCTACTTCTCTAACAAAGCATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTGACAACTTCATTAGTCACCTTTATGCAGCGCTGCAGAGGAAGAACATTGAAGCGTATATTGATTACAGATTAAACAGGGGCGAAGAAATTTCACCTGCTCTCCTCTCTGCAATAGAAGAATCAAAGATTTATGTCATCGTTTTCTCCCAAGACTATGCATCTTCCACTTGGTGCTTGAATGAACTCACTAAGATACTTGAATGCAAGAAGAGATTTGGAAGGGATGTCATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAACAAAGATACAATGAAGCATTCGAAAAGCATGAGCAGCACCTTAAGCACGATAAAGTGCAAGGATGGAAGGATGCTCTAACTGAAGCTGCTAAACTTGCAGGCTGGGATTCAAAAGTCACCAGGCCAGAACACGCACTTGTTGAAGAAATTGTGGAAGATATTTTGAGAAAATTGAATCGTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTGAAAAAAATATTGAAGGAATTCAGTCCTTGTTGCATCTTGAGTCAACGGATGTTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATTTGTAATCAAATATATCAGAAATTGGCAGTGCAGTTTGATTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAATAGACAGTATCAGAAGAAAATATCTGTCTGTGCTTCTAAAGGAAGAGATAAAGAAATCCCCTGATTTATCATATTACAATGAAAGGCTCAAACGGACAAAGGCTATCCTCATTCTTGATGATGTTACCGATTCAGCTATACTTAAAAAATTAATAGGAGGGAGTGGTAGTTTTGGGCAGGGCAGTAGAATCATTATGACCAGTAGAGACAGACAAGTGCTTAGAAATGCTGGAGCTGATGATATCTACGAGGTTAAGGAGTTGAATTTTGATGATTCTCATAAACTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGCAGAAAAATCTTACATGGACCTGTCAGAAAAGGTGTTGAGATATGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGGTCATTGCTTTATGGCAGAACAAGAGAAGCATGGGAGAGTGAGTTGCAAAAGTTGAAAAAGGGCCAACATCTTGGTATTTTCAATGTATTAAAATTAAGTTATGATGGGCTGGAGGAGGAGGAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGTCACGAGGAGATTGAGGTAGCAGAAAGACTTGATGACTTTGGTTTCTCTTCTAAGATTGGAATGGATATTCTGAAAGATAGGGGCCTAATATCTGTCATTGATGGTAGAATTGTGATGCACGATCTAATAGAAGAAATGGGTAAAGAAATTGTTCGTAAAGAGTGTCCTCAGCATCCTGGAAAACGCAGCCGATTGTTTAATGCTGAGGAAATTTGTGAGGTTTTAAGAAAGAATAAGGGGTCAGATGCAATACAGTGTATATTACTAGATACGAGCAAAATAAAACTAAATACATATCAGATGTGTCTCAATTTACCCAACTTGAAAAGGCTCAACCTGAGTCATTCTCTGAAACTTACTAGAATACCAGACCTTTCTCTGTCACCGAATATTGAAGAACTAATTCTGAGTTATTGTCAAAAGTTGATTAAAGTTCACTCTTCGATATTCCTCAGCAAGCTCAGTTGTTTATGTTTAGATCATTGTTATCATCTCAAAAGTGTAAATATTCCCAACAAGATTTTATCCACATCTCCAGGATTGATCATTCTTTCTCACTGTGAGGAGCTTGAAATGTTTTCAACCAGTCAACCCAGATACCTTCATGTGAAACTGGAGGGTCAACGTCCAACTTTCTCAAGTTTACTTTTGGGAGGGACTGTTAAATTCCATAATGCTAAAGGTATTTTCCCAACTTCCAGTGAAATTTCCTCAATTAGTTTTGACAGATATAACGAAGAAGAAGTGGGTAATAATACTATATACTCACAATGTGAAGTGTCGACAATACTCGAAGGTGTACCCTCAAACTTTCAAAATCTCAAGAGGCTCTGTCACTTAGATCTCTCTCACTGTTCTTCCCTTACAATCTTTCCATTTGACCTTTCTGATATGAAGTTCCTAAAGCAACTTTCACTCCGTGGTTGCTCAAAATTGGAAAATTTACCCCAGATTCAGGACACGTTGGAAGATCTAGTGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAACAACTGAGTTTGTGCAGTTGCTTCAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTAGACCTTACCCACTGTAGTTCACTACAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAACCTTGATTTGTGTGGTTGCTCAAGTCTGAGGACCTTCCCAGAGATCACAGAGCCGGCTCCTACTTTTGATCACATTAACTTGATATGTACGGCTGTTAAAGAACTGCCTTCCTCATTTGCCAATTTGGTTAATCTTCGATCCCTGGAGCTCCGCAAATGCACTGATCTGGAGTCACTTCCAAACTCCATTGTTAATCTCAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGTGCCAGATTAACAGAAATCCCTAGAGATATCGGTCGCTTGACGTCATTAATGGAACTGTCACTGTGTGATAGCGGAATTGTGAACCTTCCTGAGAGCGTTGCTCATCTTTCAAGCTTGAAATCGCTTGATTTAAGCGACTGCAAAAAGCTTGAATGCATCCCAGAGATTCCACCATTTCTAAAAAAACTAGTGGCATTGGATTGCCCATCCATTAGAAGAGTGATGTCCAATTCTCTTGTTCCAAACTTGTCAAATTCCAAAGAGGGTTTCTTCAAATTTCTTTTGACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGACCGACGATAGATATAGGTGTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTTTTAAGCGATGATAGGCTCAGTGGTTTCGCTTTGTGTGTGGTTTTTGAAGTGTTAGATACGAAAGTTGTTAAAGATGGGATGATGAAGAGAGAGGTGTTGATAAAGATCACACATTGGTGTGGAAATTTAACTTGGAGTCCCTAA 3363 0.3946 MSGSSSSFPVSTSLTKHDVFLSFRGEDTRDNFISHLYAALQRKNIEAYIDYRLNRGEEISPALLSAIEESKIYVIVFSQDYASSTWCLNELTKILECKKRFGRDVIPVFYKVDPSTIRKQEQRYNEAFEKHEQHLKHDKVQGWKDALTEAAKLAGWDSKVTRPEHALVEEIVEDILRKLNRYSTSYDQGIIGIEKNIEGIQSLLHLESTDVRIIGICGMGGIGKTTICNQIYQKLAVQFDSSSLVLDVQEKIQRDGIDSIRRKYLSVLLKEEIKKSPDLSYYNERLKRTKAILILDDVTDSAILKKLIGGSGSFGQGSRIIMTSRDRQVLRNAGADDIYEVKELNFDDSHKLFSLHAFKQKSSAEKSYMDLSEKVLRYAKGIPLALQILGSLLYGRTREAWESELQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFLDIACFYRGHEEIEVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIEEMGKEIVRKECPQHPGKRSRLFNAEEICEVLRKNKGSDAIQCILLDTSKIKLNTYQMCLNLPNLKRLNLSHSLKLTRIPDLSLSPNIEELILSYCQKLIKVHSSIFLSKLSCLCLDHCYHLKSVNIPNKILSTSPGLIILSHCEELEMFSTSQPRYLHVKLEGQRPTFSSLLLGGTVKFHNAKGIFPTSSEISSISFDRYNEEEVGNNTIYSQCEVSTILEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSDMKFLKQLSLRGCSKLENLPQIQDTLEDLVVLILDDTAIQALPSSLCRLVGLQQLSLCSCFNLEIIPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGIVNLPESVAHLSSLKSLDLSDCKKLECIPEIPPFLKKLVALDCPSIRRVMSNSLVPNLSNSKEGFFKFLLTNAQQLDSGGRANIEEDARLRMTDDRYRCVFFCFPGSAVPGWFHFRGKGHSVTINEDLSFLSDDRLSGFALCVVFEVLDTKVVKDGMMKREVLIKITHWCGNLTWSP* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3325 1120 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 156 IPR035897 -
Pvu2g3325 1120 Gene3D Ribonuclease Inhibitor 861 1021 IPR032675 -
Pvu2g3325 1120 ProSiteProfiles TIR domain profile. 15 179 IPR000157 GO:0007165
Pvu2g3325 1120 SMART till_3 16 153 IPR000157 GO:0007165
Pvu2g3325 1120 Gene3D - 184 339 IPR027417 -
Pvu2g3325 1120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 791 1003 IPR044974 GO:0006952
Pvu2g3325 1120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 552 622 IPR044974 GO:0006952
Pvu2g3325 1120 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 533 IPR044974 GO:0006952
Pvu2g3325 1120 SMART AAA_5 210 344 IPR003593 -
Pvu2g3325 1120 Pfam C-JID domain 1047 1091 IPR045344 -
Pvu2g3325 1120 Gene3D - 343 428 IPR042197 -
Pvu2g3325 1120 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 552 622 - -
Pvu2g3325 1120 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 533 - -
Pvu2g3325 1120 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 791 1003 - -
Pvu2g3325 1120 SUPERFAMILY L domain-like 482 980 - -
Pvu2g3325 1120 Pfam NB-ARC domain 195 412 IPR002182 GO:0043531
Pvu2g3325 1120 Pfam TIR domain 16 185 IPR000157 GO:0007165
Pvu2g3325 1120 Gene3D Ribonuclease Inhibitor 699 860 IPR032675 -
Pvu2g3325 1120 Gene3D Ribonuclease Inhibitor 511 648 IPR032675 -
Pvu2g3325 1120 PRINTS Disease resistance protein signature 213 228 - -
Pvu2g3325 1120 PRINTS Disease resistance protein signature 285 299 - -
Pvu2g3325 1120 PRINTS Disease resistance protein signature 379 393 - -
Pvu2g3325 1120 PRINTS Disease resistance protein signature 952 968 - -
Pvu2g3325 1120 Gene3D - 14 183 IPR035897 -
Pvu2g3325 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3325 Pvu-Chr2 48201716 48206708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3325 812 985 WRKY Transcription Factor Family AT4G12020 31.818 2.28e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3325 - - pvu:PHAVU_002G323800g 1540.01