Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3324 ATGTCAGGAAGTCCTTCATCATTCCCCGTGTCTGCTTCTCTAACAAAGCATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTGACAACTTCATTCGTCACCTTCATGCAGCACTGCAAAGGAAGAACATTCAAGCATATATTGACGAGAGACTACCCCGGGGCGAAGAAATTTCACCTGCACTACTCTCTGCAATAGAAGAATCAAAGATTTATGTCATCGTTTTCTCCCAAAACTATGCATCTTCCACTTGGTGCTTGAATGAACTCACTAAGATACTTGAATGCAAGAAGAGATATGGAAGGGATGTGATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAACAAAGATTCAAAGAAGCATTTGATGAGCATGAACAGCGGCTTAAGCACGACATGGACAGAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGAACTTGCAGGCTGGGATTCAAAAGTCACCAGGAATGACCACAAACTTGTTGAAAAAATTGTGGAAGATATTTTGGGAAAATTGAATCTTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTCAAAAACATATTGAAGGAATTCAGTCCTTGTTGCATCCTGAGTCACCGGATGTTCGGATCATAGGAATTTGGGGCATGGGAGGAATAGGAAAAAGTACAATTTGTGATCAAATATATCAGAAATTGGCATTGCAGTTTGATTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAGAGATGGAATAGATAGTATCAGAACAAAATATCTGTCTGAGCTTCTAAAGGAAGAGAAATCTTCTTCTTTACCATATTACAAAGAAAGGCTCAAACGGACAAAGGCTCTCCTCATTCTTGATGATGTTACCGATTCAGCTCAACTTCAAAAATTAATAGGATGGAGTGATAGTTTTAGGCAGGGCAGTAGAATCATTATGACCAGTAGAGACAGACAAGTGCTTAAGAATGCTAGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTCTGATGATTCTCTAAGACTTTTTAGTTTACATGCTTTTAAACAAAAATCTTCAGAAGAAATTGCTTACAAGGAACTGTCAGGAAAGGTGTTGAGTTATGCAAAAGGGATTCCGTTAGCTCTCCAGATTTTGGGCTCATTGCTTTGTGACAGAACAAAAGAAGCATGGGAAAGTCAGTTGCAAAAGTTGAAAAAGGGCCAACATCATGGTATTTTCAATGTATTAAAATTAAGTTATGATGGGCTCGAGGAGGTGGAGAAGAATATATTTCTTGACATTGCTTGCTTTTATAGAGGATACCAGGAGATTGTGCTGGCAGAAATACTTGATGACTGCAATGGTTTCTCTACTAAGATTGTAATGGATGTTCTCAAAGATAGGTGCCTAATATCTGTCTTTAATGGTATTATTATGATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTAAAGAGTGTCGTCGGCATCCTGGAAAACGCAGCCGACTGTTTAATGCTGAGGAAATTTGTGATGTTTTAAGAAAAAACAAGGGGTTAGATGCAATACAGTGTATATCACTAGATACGAGCAAAGTAAATGAAGTTGTAGTACATGCACAAAGTTTCGAAAAGATGGACAATCTTAGGATGCTTATGCTCAACACGCCAAAATACACGTCAAATGTGTCTCTTGAATCATCTATTGTAGGTCTGCCAGACACTCTAAAGATTCTTTATTGGAAACATTTCCCTCAAAGATCTTTGCCTCCAAACTTTTGCCCGCAAAATCTAGTGACCCTCGAAATGCCATACTGCCATCTTGAACAACTCTGGGAAGGAGATCAGAATTTACCCAACTTGAAAAGGCTCGACCTGAGTTATTCTCGGAAACTTACTAGAATACCAGACCTTTCTATGTCACCAAATATTGAAGAAATAATTCTGAAAAGTTGTGAAAAGTTGATTGAAGTTCACTCTTGGATATTCCTCAACAAGCTCAGTTGTTTATGTTTAGATGATTGTAATGATCTGAATAGTGTAAATATTCCCAGCAACATTTTATCCACATCACCAGGATGGATTACTCTTTCCCGTTGTCCGAAGCTTAATATGTTTTCGATCAGTAAACCCAGATTCCCTCATGTGATACTGGAGCGTCAACTTCAAACTTTCTCAATATTCCCTCGTCAGGAACCGGATATGACGAATTTCTCAGGACGGCGTGGTAAACGTCGACACCGTGGTCCTTTTTTCCCAACTTCCAGTGAAATTTTCTCAATTACTTTTGACAGATATAAGGAAGAAGAAGTGGCTAATGATACTATATGTTTTAAAGTGTTCACAAAACTCATGAAGCTCTGTCACTTCAACTTTAATCGCAAGAAGCTCTGTTACTTAGATCTCTCTCACTGTTCTTCCCTTACAATCTTTCCATTTCACCTTTCTGATATGAAATTCATAAAGAAACTTTCTCTCAGTGGTTGCTCAAAATTGGAAAATTTACCCGAGATTCAGGACACGTTGGAAGATCTAGTGGTGCTCATCTTAGACGGCACAGCCATACAGGCACTACCTTCATCCTTGTGCCGTTTGGTAGGGCTTCAAGGACTGAGTTTGCGCAGTTGCTTGAATCTTGAGATTATTCCATCTTCCATTGGAACCCTCACCAGACTATGCAAGTTAGACCTTACCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAACCTTGATTTGCGTGGTTGCTCAAGGCTGAGGACCTTCCCAGAGATCGCGGAGCCGGCTCATACTTTTGCTCACATTAACTTAACATCTACGGCTGTTAAAGAACTGCCTTCCTCATTTGGCAATTTCGTTAATCTTCGATCCCTGGAACTCCAAGAGTGCATTCATCTCGAGTCACTTCCAAACTCCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAAGCCACATCGGTCGCTTGACGTCATTAATGGAACTGTCACTGCGTGATAGCGGAATCGTGAACCTTCCTGAGAGCATTGCTCATCTTTCAAGCTTGAACTCGCTCGATTTAAGCGACTGCAAAAAACTTGAATCCATCCCACAGATTCCACCATTTCTAAAACAACTCGTGGCATTGGATTGCCCATCCATCAGAAGAGTGATGTCAAATTCTCTTGTTCCAAACTTCTCAAACTCCAAAGAGGGTGTCTTCAAATTTCATTTCACCAATGCTCAGCAACTGGATTCAGGTGCTCGTGCTAACATTGAGGAGGATGCATGGGTTAGGATGACCGACGATGCATATAGGTCTGTGTTCTTCTGTTTTCCAGGGAATGCAGTTCCTCGTTGGTTCCATTCTCGTGGGAAGGGACATTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATACGAAAGCTGTTAAATGTAGATATGGTTCTTTTGGTTACAGTCTAAAATTTGAATCTGATGATGATGATGGCACACAGATCATTCTAAATAATGATGTGTTAAACAGCTATTTCAAATGGAATGGTGAACACAGATGTGTTGATGAAGATCACACATTCGTGTGGAAATTTAACATGGAGTCCCTAACGGCGAGCCGCAAGAGCCTTAGGGTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCTGTATAGTTACAAATCAGGTGTGAGAGTGATGGCATCAGACATCACAATAAAAGAATGCGGCATATGCCCCCTTTATACCAAAAAGAAAGATGATAAATATGGTGGTGATGTTGACATTGAAGAATCCAGTGGAAGCAATGTTGCACAGTCTTCAAGAGAAACAAGGAAAGATAGGAAGAGAAAGGCCGAAAGCTACCCTGTCAACTAG 3978 0.4027 MSGSPSSFPVSASLTKHDVFLSFRGEDTRDNFIRHLHAALQRKNIQAYIDERLPRGEEISPALLSAIEESKIYVIVFSQNYASSTWCLNELTKILECKKRYGRDVIPVFYKVDPSTIRKQEQRFKEAFDEHEQRLKHDMDRVQGWKDALTEAAELAGWDSKVTRNDHKLVEKIVEDILGKLNLYSTSYDQGIIGIQKHIEGIQSLLHPESPDVRIIGIWGMGGIGKSTICDQIYQKLALQFDSSSLVLDVQEKIQRDGIDSIRTKYLSELLKEEKSSSLPYYKERLKRTKALLILDDVTDSAQLQKLIGWSDSFRQGSRIIMTSRDRQVLKNARADDIYEVKELNSDDSLRLFSLHAFKQKSSEEIAYKELSGKVLSYAKGIPLALQILGSLLCDRTKEAWESQLQKLKKGQHHGIFNVLKLSYDGLEEVEKNIFLDIACFYRGYQEIVLAEILDDCNGFSTKIVMDVLKDRCLISVFNGIIMMHDLIQEMGQEIVRKECRRHPGKRSRLFNAEEICDVLRKNKGLDAIQCISLDTSKVNEVVVHAQSFEKMDNLRMLMLNTPKYTSNVSLESSIVGLPDTLKILYWKHFPQRSLPPNFCPQNLVTLEMPYCHLEQLWEGDQNLPNLKRLDLSYSRKLTRIPDLSMSPNIEEIILKSCEKLIEVHSWIFLNKLSCLCLDDCNDLNSVNIPSNILSTSPGWITLSRCPKLNMFSISKPRFPHVILERQLQTFSIFPRQEPDMTNFSGRRGKRRHRGPFFPTSSEIFSITFDRYKEEEVANDTICFKVFTKLMKLCHFNFNRKKLCYLDLSHCSSLTIFPFHLSDMKFIKKLSLSGCSKLENLPEIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQGLSLRSCLNLEIIPSSIGTLTRLCKLDLTHCNSLQTFPSTIFNLKLRNLDLRGCSRLRTFPEIAEPAHTFAHINLTSTAVKELPSSFGNFVNLRSLELQECIHLESLPNSIVNLKLLSKLDCSGCAKLTEIPSHIGRLTSLMELSLRDSGIVNLPESIAHLSSLNSLDLSDCKKLESIPQIPPFLKQLVALDCPSIRRVMSNSLVPNFSNSKEGVFKFHFTNAQQLDSGARANIEEDAWVRMTDDAYRSVFFCFPGNAVPRWFHSRGKGHSVTINEDLSFCSDDRLTGFALCVVFGVLDTKAVKCRYGSFGYSLKFESDDDDGTQIILNNDVLNSYFKWNGEHRCVDEDHTFVWKFNMESLTASRKSLRVCDARSFTFEISLYSYKSGVRVMASDITIKECGICPLYTKKKDDKYGGDVDIEESSGSNVAQSSRETRKDRKRKAESYPVN* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3324 1325 PRINTS Disease resistance protein signature 215 230 - -
Pvu2g3324 1325 PRINTS Disease resistance protein signature 285 299 - -
Pvu2g3324 1325 PRINTS Disease resistance protein signature 379 393 - -
Pvu2g3324 1325 PRINTS Disease resistance protein signature 622 638 - -
Pvu2g3324 1325 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 697 IPR044974 GO:0006952
Pvu2g3324 1325 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 873 1247 IPR044974 GO:0006952
Pvu2g3324 1325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 438 IPR027417 -
Pvu2g3324 1325 SMART LRR_typ_2 848 871 IPR003591 -
Pvu2g3324 1325 SMART LRR_typ_2 1013 1036 IPR003591 -
Pvu2g3324 1325 SMART LRR_typ_2 895 919 IPR003591 -
Pvu2g3324 1325 SMART LRR_typ_2 624 648 IPR003591 -
Pvu2g3324 1325 Pfam C-JID domain 1129 1285 IPR045344 -
Pvu2g3324 1325 Gene3D - 14 186 IPR035897 -
Pvu2g3324 1325 SMART till_3 16 155 IPR000157 GO:0007165
Pvu2g3324 1325 MobiDBLite consensus disorder prediction 1286 1325 - -
Pvu2g3324 1325 SUPERFAMILY L domain-like 484 716 - -
Pvu2g3324 1325 Gene3D - 343 428 IPR042197 -
Pvu2g3324 1325 Pfam TIR domain 16 187 IPR000157 GO:0007165
Pvu2g3324 1325 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Pvu2g3324 1325 Gene3D Ribonuclease Inhibitor 943 1102 IPR032675 -
Pvu2g3324 1325 Gene3D Ribonuclease Inhibitor 507 725 IPR032675 -
Pvu2g3324 1325 Gene3D Ribonuclease Inhibitor 787 942 IPR032675 -
Pvu2g3324 1325 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pvu2g3324 1325 Pfam NB-ARC domain 196 414 IPR002182 GO:0043531
Pvu2g3324 1325 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 697 - -
Pvu2g3324 1325 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 873 1247 - -
Pvu2g3324 1325 Gene3D - 187 339 IPR027417 -
Pvu2g3324 1325 SUPERFAMILY L domain-like 794 1071 - -
Pvu2g3324 1325 MobiDBLite consensus disorder prediction 1308 1325 - -
Pvu2g3324 1325 Pfam Leucine Rich Repeat 603 622 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3324 Pvu-Chr2 48192553 48199070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3324 801 971 WRKY Transcription Factor Family AT4G12020 34.884 5.86e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3324 - - pvu:PHAVU_002G323800g 1957.18