Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3323 ATGTCAGAAAGTCCTTCATCATTGGCCGTGTCTACTTCTCTAACAAGGCATGATGTGTTTCTCAGCTTCAGAGGCGAAGACACACGTGACAACTTCATTAGCCACCTTTATGCAGCACTGCAAAGGAAGAACATTGAAGCATATATTGATTATAGACTACTCAGGGGCGAAGAAATTTCACCTGCACTGCTCTCTGCAATAGAAGAATCAAAGATTTATGTCATCGTTTTCTCCCAAAACTATGCATCTTCCACTTGGTGCTTGAATGAACTCAGTAAGATACTTGAATGCAAGAAGAGATTTGGAAGGGATGTGATACCTGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGGAAGAAAGATACAAAGAATCATTCGATGATCATGAACAGCGGTTTATGCACGACATGGTCAAAGCGCAAGGATGGAAGGATGCTCTCACCGAAGCTGCTGGACTTTCAGGCTGGGATTCAAAAGTCACCAGGCCAGAACACACACTTGTTGAAGAAATTGTGGAAGATATTTTGAGAAAATTGAATCGTTATTCCACCAGTTATGATCAAGGAATCATCGGCATTGAAAAACACATTGAAGGAATTCAGTCCTTGTTGCATCTTGAGTCACCGCATGTTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATTTGTTATCAAATATATCACACATTGGCTTTGCAGTTTGGTTCCAGCAGCCTTGTTTTAGACGTTCAAGAAAAAATACAAAAAGATGGAATAGACAGTATCAGAACAAAATATCTGTCTGAGCTTCTAAAGGAAGAGATAAAGAAATCCCATGGTTTATCATATTACAATGAAAGGCTGAAACGGACAAAGGCTCTCCTCATTCTTGATGATGTTACCGATTCAGCTCTACTTAAAAAATTAATAGGAGGGAGTGATAGTTTTGGGCAGGGCAGTAGAATGATTATCACCAGTAGAGACAAACAAGTGCTTAAGAATGCTAGAGCTGATGATATCTACGAAGTTAAGGAGTTGAATTTTGATGATTCTCAGAAACTTTTTAGTTTACTTGCTTTTAAACAAAAATCTTCAGAAGAAATTGCTTACAGGGAACTGTCAGAAAAGAATTTACCCAAGTTGAAAAGGGTCGACCTGACTGGTTCTCTGAAACTTACTAGAATACCAGACCTTTCTATGTCACCAAATATTGAAGAAATAATTCTGAGTTCTTGTGAAAAGTTGATTGAAGTTCACTCCTCGATATTCCTCACCAAGCTCAGTTATTTATGTTTAGATAATTGTTCTAATCTCGAAAGTGTAAATATTCCCAGCAACATTTTATCCACATCACCAGGATGGATTAATATTTCCCGTTGTCCGAAGCTTAATATGTTTTCAACCAGTGAACCCAGATTCCCTCATGTCATACTCGAGCGTCAACGTCAAACTTTCTCAAGATTCCCTCGTCTGGAACCGGATATGATGAAAGAGATCAATTTCTCACGACGGCGTCGTAAACGTCGACGCCATGGTCTTTTCCCAACTTCCAGTCAAATTTTCTCAATTACTTTTGACAGATATAAGGAAGAAGAAGTGGCTAATAATACCATACACTTAAAAGTGTTCACAAAACTCAAGGAAGGTGTGTCCTTAACCTTTAGTCGCAAGCAGTTCTATCGCTTAGATCTCTCTCACTGTTCTTCTCTTACAATCTTTCCATTTCATCTTTCTGATATGAAATTCCTAAAGCAACTTTCTCTCCGGGGTTGCTCAAAATTGGAAAATTTACCCGAGATTCAGGACACGTTGGAAGATTTAACGGTGCTCATCTTAGACGACACAGCCATACAGGCACTACCTTCATCTTGGACACGTTTGGTAGGGCTTGAAGAACTGAGTTTGCACCGTTGCTTGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCGGACTATGCAAGTTAGACCTTACCCACTGTAATTCACTTCAAACTTTTCCAAGCACCATTTTCAATTTGAAGTTGAGGAAGCTTGATTTGTGTGGTTGCTCAAGCCTGAGGACCTACCCAGATATCACGGAGCCGGCTCCTACTTTTGCTCACATTAACTTAACATCTACGGCTATTAAAGAACTGCCTTCCTCATTTGCCAATTTGGTTAATCTACGATCCCTGGAGCTCCGCAAATGCATTGATCTCGAGTCACTTCCAAACTCCATTGTTAATCTGAAGCTTCTCTCTAAACTTGATTGTTCAGGGTGTGCCAAATTAACAGAAATCCCAAGACATGTTGGTCGTTTGACGTCATTAATGGAACTCTCACTGCGTGATAGCGGAATCGTGAGCCTTCCTGAGAGCTTTGCTCATCTTTCGAGCTTGAAATCGCTTGATTTAAGCGAATGCGAAAAGCTTGAATGCATCCCACCGATTCCACCATTTCTAAAACAACTAGTGGCATTGGATTGCCCATCCGTTAGAAGAGTGATGTCAAATTCTCTTGTTCGAAACTTGTCAAATTCCAAAGAGGGTGTCTTCAAATTTCATTTCACCAATGCTCAACAACTGGATTCAGGTGGTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGATCGACGATACATATAGGTGTGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGGTTGGTTCCATTTTCGTGGGAAGGGAGATTCAGTGACTATAAATGAAGATTTAAGTGTCTGCAGCGATGATAGGCTCACTGGTTTCGCTTTGTGTGTGGTAGTTGGAGTGTTAGATACGAATGATATTGAAGGTGGATATGGTTCTTTTGGTTACAGTCTAAAATTTGAATCTGATGATGATGGCACACAGATCATTCCAAATAATGATGTGTTCACCAGCTATTTCGAATGGGGTTATGAAGACAGAGGTCTTGATCAAGATCACACATTCGTTTGGAAATTTAACATGAAGTCCCTAAGGGCGAAGGGCATGAGCCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCGCGTGATTATGACGTTGGCATCACAATAAAAGAATGCGGCATATGCCCTCTTTATTCCAAAAAGAAAGATGATGAATATGGTGGTGCTGGTGAGATTGAAGAATCCAGTGGAAGCAATGTTGCACAGTCTTCAAGAGACACAAGGGAAGATAGGAAGAGGAAGGCCAGTCAACTAGTCTCTCTCCTGCTAATTAGTCTTTCATTG 3240 0.4068 MSESPSSLAVSTSLTRHDVFLSFRGEDTRDNFISHLYAALQRKNIEAYIDYRLLRGEEISPALLSAIEESKIYVIVFSQNYASSTWCLNELSKILECKKRFGRDVIPVFYKVDPSTIRKQEERYKESFDDHEQRFMHDMVKAQGWKDALTEAAGLSGWDSKVTRPEHTLVEEIVEDILRKLNRYSTSYDQGIIGIEKHIEGIQSLLHLESPHVRIIGICGMGGIGKTTICYQIYHTLALQFGSSSLVLDVQEKIQKDGIDSIRTKYLSELLKEEIKKSHGLSYYNERLKRTKALLILDDVTDSALLKKLIGGSDSFGQGSRMIITSRDKQVLKNARADDIYEVKELNFDDSQKLFSLLAFKQKSSEEIAYRELSEKNLPKLKRVDLTGSLKLTRIPDLSMSPNIEEIILSSCEKLIEVHSSIFLTKLSYLCLDNCSNLESVNIPSNILSTSPGWINISRCPKLNMFSTSEPRFPHVILERQRQTFSRFPRLEPDMMKEINFSRRRRKRRRHGLFPTSSQIFSITFDRYKEEEVANNTIHLKVFTKLKEGVSLTFSRKQFYRLDLSHCSSLTIFPFHLSDMKFLKQLSLRGCSKLENLPEIQDTLEDLTVLILDDTAIQALPSSWTRLVGLEELSLHRCLNLEIIPSSIGSLTGLCKLDLTHCNSLQTFPSTIFNLKLRKLDLCGCSSLRTYPDITEPAPTFAHINLTSTAIKELPSSFANLVNLRSLELRKCIDLESLPNSIVNLKLLSKLDCSGCAKLTEIPRHVGRLTSLMELSLRDSGIVSLPESFAHLSSLKSLDLSECEKLECIPPIPPFLKQLVALDCPSVRRVMSNSLVRNLSNSKEGVFKFHFTNAQQLDSGGRANIEEDARLRMIDDTYRCVFFCFPGSAVPGWFHFRGKGDSVTINEDLSVCSDDRLTGFALCVVVGVLDTNDIEGGYGSFGYSLKFESDDDGTQIIPNNDVFTSYFEWGYEDRGLDQDHTFVWKFNMKSLRAKGMSLRLCDARSFTFEISPRDYDVGITIKECGICPLYSKKKDDEYGGAGEIEESSGSNVAQSSRDTREDRKRKASQLVSLLLISLSL 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3323 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 559 644 - -
Pvu2g3323 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 384 451 - -
Pvu2g3323 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 630 850 - -
Pvu2g3323 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 369 - -
Pvu2g3323 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 373 IPR027417 -
Pvu2g3323 1080 Pfam C-JID domain 885 1033 IPR045344 -
Pvu2g3323 1080 Gene3D - 185 341 IPR027417 -
Pvu2g3323 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Pvu2g3323 1080 Gene3D - 14 184 IPR035897 -
Pvu2g3323 1080 SUPERFAMILY L domain-like 539 826 - -
Pvu2g3323 1080 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Pvu2g3323 1080 MobiDBLite consensus disorder prediction 1038 1068 - -
Pvu2g3323 1080 PRINTS Disease resistance protein signature 215 230 - -
Pvu2g3323 1080 PRINTS Disease resistance protein signature 287 301 - -
Pvu2g3323 1080 PRINTS Disease resistance protein signature 790 806 - -
Pvu2g3323 1080 Gene3D Ribonuclease Inhibitor 696 863 IPR032675 -
Pvu2g3323 1080 SMART till_3 16 155 IPR000157 GO:0007165
Pvu2g3323 1080 Pfam NB-ARC domain 196 374 IPR002182 GO:0043531
Pvu2g3323 1080 Gene3D Ribonuclease Inhibitor 539 695 IPR032675 -
Pvu2g3323 1080 Gene3D Ribonuclease Inhibitor 352 483 IPR032675 -
Pvu2g3323 1080 SUPERFAMILY L domain-like 376 613 - -
Pvu2g3323 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 559 644 IPR044974 GO:0006952
Pvu2g3323 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 369 IPR044974 GO:0006952
Pvu2g3323 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 384 451 IPR044974 GO:0006952
Pvu2g3323 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 630 850 IPR044974 GO:0006952
Pvu2g3323 1080 Pfam TIR domain 17 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3323 Pvu-Chr2 48183168 48188583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3323 630 798 WRKY Transcription Factor Family AT4G12020 36.686 2.07e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3323 - - pvu:PHAVU_002G323000g 2098.55