Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3321 ATGGCAGCCACCGAACACAGACTAAGCCTGGACGCTGAAAAACAGAGCCTTCTCAATCTCCACACCGAGAACCACTTCACCGCCGGCGAAGTCGTCCGCGACATCATCATCGGCGTTTCCGACGGCCTCACCGTCCCCTTCGCTCTCGCCGCCGGCCTCTCCGGCACCAATGCCACCTCCGCCGTCGTCCTCACTGCCGGCATAGCTGAAGTCGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCAGCGAAAAGTGAAGCCGATCACTACGCCAGAGAATTGAAAAGGGAGCAAGAAGAAATCATCGCCGTTCCAGAAACTGAAGCAGCAGAGGTAGCAGAAATACTAGCTGAGTATGGAGTAGAGGCACATGAATATACACACCTGTGGTTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCACAGTGCAATGACAATTGCGAGTGCTTATGTAATAGGTGGTCTTGTTCCTCTTGCTCCTTACATCTTCATTCCGAAAGCATCAGAAGCAGTTCTGTTCTCAGTTGTGGTTACCATGTTTGCACTGCTGCTTTTTGGTTATGCCAAGGGTCACTTCACTGGCAATAAACCCTTCAGGAGTGCTTTGGAAACAGCTCTCATCGGTGCCATTGCTTCTGCAGCAGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 696 0.5244 MAATEHRLSLDAEKQSLLNLHTENHFTAGEVVRDIIIGVSDGLTVPFALAAGLSGTNATSAVVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELKREQEEIIAVPETEAAEVAEILAEYGVEAHEYTHLWFELGLEKPDPRRALHSAMTIASAYVIGGLVPLAPYIFIPKASEAVLFSVVVTMFALLLFGYAKGHFTGNKPFRSALETALIGAIASAAAFGMAKAFNP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3321 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 131 IPR008217 GO:0005384|GO:0030026
Pvu2g3321 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 141 229 IPR008217 GO:0005384|GO:0030026
Pvu2g3321 231 Coils Coil 83 103 - -
Pvu2g3321 231 CDD CCC1 11 229 - -
Pvu2g3321 231 Pfam VIT family 32 226 IPR008217 GO:0005384|GO:0030026
Pvu2g3321 231 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 141 229 - -
Pvu2g3321 231 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 11 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3321 Pvu-Chr2 48170586 48172329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3321 1 227 Nodulin-like Gene Family AT3G43660 25.439 1.05e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3321 K22736 - gmx:100793585 337.035