Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3277 ATGGAAAACCTCTTTTTCAACTGTTTCATTGGATACTGTCTTCTTCATTCCCTCTTGCTTGTGCATGGCAAACAATTGTCATGCAATGAAACACCCTACCCCCGTCTCTGCAAACATTACGTTGACACTACCATGGATGCTTCATCCTCTTCCTTCCATGACATGACCCTTAAGGTCAGCCTGAACCAAGCCATGGAGGTTTATAAACTTGTCTCAAACATGGACTTGAATAATTTCAAAGACAAAAGATCCAAGTCCGCTTGGGAAGATTGTTTGGAGCTCTATGAGGACACACTTTATCAGCTCAAACGCTCACTGAACTCCAACAATCTAAATGACAGGTTGACTTGGCAAAGTGCTTCCATTGCCAATCACCAAACATGCCAAAATGGTTTCACTGAGTTCAACCTTCCCTCTCACCTAAACCACTTCCCCTCCATGTTAACCAACTTCTCCAAACTTCTTAGCAATTCCTTGTCCCTTAGCAAGGCTATGAGTTTGGCATCATTGTCTTCGACTAAACAAAATGGTGGGCGAAGGTTGCTTTCCGATGGCTTCCCCTCTTGGATGTCACATTCAGACAGAAAGCTTCTTCAGGAAACAGCATCAAAAGCTGATGTTGTGGTGGCGCAGGATGGGAGTGGGAACTATAAGACCATCTCAGAGGGTGTGGCTGCAGCTTCTAAGCTCAGTGGGAAAGGGCGTGTTGTGGTGCATGTCAAAGCTGGTGTTTACAAAGAGAGTATCGATATCAAGAGGACTGTGAAGAACTTGATGATCATCGGAGATGGGATGGGTGCTACTATTGTTACTGGTAGTAATAACGCTCAAGATGGTTCCACTACCTTTCGCTCTGCTACTTTTGCGGTTTCTGGAGATAACTTCATTGCTCGGGACATCACCTTCGAGAACACCGCCGGACCGCAGAAGCACCAAGCGGTGGCTCTCCGTTCCGGTGCCGACCACTCTGTGTTTTACCGGTGCAGCTTTAAGGGGTACCAAGACACCTTATACGTCTACGCCAACCGGCAATTCTACCGTGACTGTGACATCTACGGAACCGTAGACTTCATTTTCGGGGACGCCGTGTCGGTGTTACAAAACTGCAACATATACGTGAGGAAACCGATGAGCAACCAGCAGAACTCGGTGACAGCACAAGGAAGAACCGACCCTAACGAGAACACAGGCATCATCATCCATAACTGTGTCATCACTGCAGCTGGGGACCTGAAAGCGGTGCAGGGCTCTTTCAGAACCTATCTTGGTCGTCCATGGCAGAAGTATTCAAGGACTGTGGTTATGAAGAGTGCCCTTGATGGCTTGATTAACCCTGCAGGTTGGTCTGAGTGGAGTGGAAACTTTGCTCTGAGCACTCTGTATTACGGTGAATATGCGAACACCGGAGCAGGAGCCAGCACCGGAGGAAGGGTGAAATGGGGAGGTTTTCGTGTGATGTCGAGTTCTGATGCGGTGAAGTTCACCGTGGGAGAATTCTTGGCCGGTGGGTCGTGGATTCCGGGGAGTGGCGTGCCCTTCGATGCAGGGTTATGA 1554 0.4846 MENLFFNCFIGYCLLHSLLLVHGKQLSCNETPYPRLCKHYVDTTMDASSSSFHDMTLKVSLNQAMEVYKLVSNMDLNNFKDKRSKSAWEDCLELYEDTLYQLKRSLNSNNLNDRLTWQSASIANHQTCQNGFTEFNLPSHLNHFPSMLTNFSKLLSNSLSLSKAMSLASLSSTKQNGGRRLLSDGFPSWMSHSDRKLLQETASKADVVVAQDGSGNYKTISEGVAAASKLSGKGRVVVHVKAGVYKESIDIKRTVKNLMIIGDGMGATIVTGSNNAQDGSTTFRSATFAVSGDNFIARDITFENTAGPQKHQAVALRSGADHSVFYRCSFKGYQDTLYVYANRQFYRDCDIYGTVDFIFGDAVSVLQNCNIYVRKPMSNQQNSVTAQGRTDPNENTGIIIHNCVITAAGDLKAVQGSFRTYLGRPWQKYSRTVVMKSALDGLINPAGWSEWSGNFALSTLYYGEYANTGAGASTGGRVKWGGFRVMSSSDAVKFTVGEFLAGGSWIPGSGVPFDAGL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3277 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 165 IPR035513 -
Pvu2g3277 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 166 IPR035513 -
Pvu2g3277 517 SMART complete 240 420 IPR006633 -
Pvu2g3277 517 Pfam Pectinesterase 206 502 IPR000070 GO:0030599|GO:0042545
Pvu2g3277 517 SMART PMEI_2 16 161 IPR006501 GO:0004857
Pvu2g3277 517 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Pvu2g3277 517 PANTHER PECTINESTERASE 19 516 - -
Pvu2g3277 517 Gene3D - 200 517 IPR012334 -
Pvu2g3277 517 SUPERFAMILY Pectin lyase-like 201 516 IPR011050 -
Pvu2g3277 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 27 164 IPR006501 GO:0004857
Pvu2g3277 517 CDD PMEI-like_3 26 138 - -
Pvu2g3277 517 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Pvu2g3277 517 Pfam Plant invertase/pectin methylesterase inhibitor 27 161 IPR006501 GO:0004857
Pvu2g3277 517 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 19 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3277 Pvu-Chr2 47862725 47866419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3277 2 517 Carbohydrate Esterase AT1G23200 49.729 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3277 - - gmx:100775898 902.894