Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3274 ATGTTCATCAAATTTGCATTTCTTTGCTTTTTTGCTACCTTGTTTCTCTTCTTCACCAAAACCTCTGGGAGCCACAACACATCATCCTCACCAGCTTGTCTCACTCAACGCTGCACTTATGGACCTAACATTAGCTACCCCTTTTGGCTTACCCATGCTGATCAACTTTGCGGTTACCATGAACTTGGCCTTTTCTGTTATGGAGGCCACAACACTTTTTCTCACATAGGATTATACTATAGGGTGAAAGATATAGACTATGAGAACCATAGGCTTCATCTGGTGGATTTGGACACTTTCAATGAAACTTGTCCCAAGGCACTCCACAGTGTTCCCTTAGGCAACCTACCACTTACTCATTCCCCCATGAACTTAAACCTTAGCTTTTACTACAACTGCAGTAACTACCCTTCTGGGGTCCCTTCTATCCCCTGTCTCACTTCTGGGGTAAATCAGTCTTTTGTGTTTGTGTTGGGGAATGAGACCAAAGGTTTTGACTGGTCGGGGAACTGTCAGGAAAATATTGTGGTGACTGTGATGAAGGATAAGATTACAAGTGATGGTGACTTAATCAGCCAATTTGCTGGTGCCATGGATGAAGGGTTCGTGCTTGAATGGCACACTGCTTCGTATTGCGTTCAGTGTGAGGCTAGTGATGGAGTCTGTGGCTACAGTAACACTGAGAAGGAGGTGTTGTGTTTCTGCAAAGATGGAAGTACAAAAAACAGCACATGTGATGCAGGGGGAAGCAGTGCTGGTTTGTCAAGATTAATTATAGGTTTAATTATAGCTGGAGGAATTGGTGCACTGCTGACATGTGTCGTAGTTTACATTTTTAGACGAAAACTGTCACCAATTTTGTCAGAAATTCGGCTGGCCAAAAAGATTGATCGAGACATTGAGGCCTTCATCAGAAATAATGGACCTCTTCCCATAAAAAGATACTCATATTCAGATATCAAGAAAATGACCAATTCTTTTGAATCCAAACTTGGACAAGGTGGCTATGGTCAAGTATATAAAGGAAATCTATGCAACAAATCTCCCGTGGCTGTGAAGCTACTGAATGCTTCCAAGGGAAACGGGGAAGAATTTATCAACGAGGTTATAAGCATAAGTAGAACATCCCATGTAAATATTGTTAATCTCCTTGGTTTCTGTCTTGAAGGCAAGAAGAAAGCTATTATATACGATTTTATGCCCAATGGATCACTTGAAAAGTACATTGGCAACAAGAATTTAGAAACTAATCAACCTTTGAGTTGGCAAAGACTACACCACATTGTTGAAGGAATAGCCAAAGGATTGGAGTACTTGCACAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTCTGTCCTAAAATCTCTGATTTTGGGATGGCCAAGCTCTGCTCAAACACAGAAAGTATCATATCTATGTATGATGCTAGAGGGACAGTTGGGTACATATCTCCAGAAATGTGGAACAGAAACTTTGGAGGGGTGTCATATAAATCTGATGTTTATAGTTATGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAATATCAGCATTGAAGCAAGCCATTCAAGTGAGACATATTTTCCCCATTGGATATACAAGCATGTTGAGGTGGGAAGAAATTTAGCATTTCATGAAGGTATGACCCCAGAGGAAAATGAGATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATACAGACAAGCCCTTCTGACAGGCCTGCTATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCATGGATCAATTGCAAATTCCACCTGAGCCATTCTTATTTACTCCTATGAAAACTGAAGTGGATATTTGCACCAGTAGTAGTAGCAGTGATTGA 1896 0.4061 MFIKFAFLCFFATLFLFFTKTSGSHNTSSSPACLTQRCTYGPNISYPFWLTHADQLCGYHELGLFCYGGHNTFSHIGLYYRVKDIDYENHRLHLVDLDTFNETCPKALHSVPLGNLPLTHSPMNLNLSFYYNCSNYPSGVPSIPCLTSGVNQSFVFVLGNETKGFDWSGNCQENIVVTVMKDKITSDGDLISQFAGAMDEGFVLEWHTASYCVQCEASDGVCGYSNTEKEVLCFCKDGSTKNSTCDAGGSSAGLSRLIIGLIIAGGIGALLTCVVVYIFRRKLSPILSEIRLAKKIDRDIEAFIRNNGPLPIKRYSYSDIKKMTNSFESKLGQGGYGQVYKGNLCNKSPVAVKLLNASKGNGEEFINEVISISRTSHVNIVNLLGFCLEGKKKAIIYDFMPNGSLEKYIGNKNLETNQPLSWQRLHHIVEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLCSNTESIISMYDARGTVGYISPEMWNRNFGGVSYKSDVYSYGMMILEMVGGRQNISIEASHSSETYFPHWIYKHVEVGRNLAFHEGMTPEENEICKKMIIVGLWCIQTSPSDRPAMSRVVEMLEGSMDQLQIPPEPFLFTPMKTEVDICTSSSSSD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3274 631 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Pvu2g3274 631 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3274 631 Gene3D Transferase(Phosphotransferase) domain 1 400 607 - -
Pvu2g3274 631 Gene3D Phosphorylase Kinase; domain 1 304 399 - -
Pvu2g3274 631 Pfam Wall-associated receptor kinase C-terminal 150 238 IPR032872 -
Pvu2g3274 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 628 IPR045874 GO:0004672
Pvu2g3274 631 ProSiteProfiles Protein kinase domain profile. 325 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3274 631 PANTHER - 15 628 - -
Pvu2g3274 631 Pfam Protein tyrosine and serine/threonine kinase 327 598 IPR001245 GO:0004672|GO:0006468
Pvu2g3274 631 SUPERFAMILY Protein kinase-like (PK-like) 306 599 IPR011009 -
Pvu2g3274 631 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pvu2g3274 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3274 Pvu-Chr2 47836194 47839193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3274 35 611 Receptor kinase-like Gene Family AT5G38260 40.333 4.46e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu2g3274 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3274 - - gmx:100781977 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3274 2 47836194 47839193 Pvu4g1647 4 43761745 43766476 PCT
Pvu4g1649 4 43778262 43783415 Pvu2g3274 2 47836194 47839193 PCT