Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3266 ATGACATGCAAGAAGAGGTGGAGAATGGCCTTCAATGCCATCTCTTTCGTCAAAGCTCTCAGCATCCAAACCCCGAGGCTCTTGCGCTCATTATCGTATCTCGCCATTGATGTTCAACAACACCACGTGCATTCCCCACGTGTCAAACGTTTCAATGTTGATAACGAACTTCTCAGTCACATGGTAAGGGACAAGACGCTCGAGTCTCTCACCCAGTTTGGAGGTGTCGAGGAACTCGCTGCACTTCTTGAAACCGATTTCAAGCGTGGGATAAGCGACGAAAAGGATGATCTTGATCACCGAAAACGTGTCTTCGGTGTGAATGTTTTCGCCAAACCTCCGTGTAAAGGTTTTTTTTCTTTTGTTCTTGAATCTTTTAAGGACACCACTATTATCATCCTTTTGGGTTGTGCTATGCTTTCTCTTGGGTTTGGGATAAAGCAGCATGGGTGGAGGGATGGATGGTACGATGGAGGAAGCATCATATTGGCGGTTATTCTCGTCATTATTGTCTCATCCGTGAGCAACTTCAACCAATCTAGACAGTTCAAGAAGCTTTCTGCGAAGAGTGAGAACAGAGGAGTGGAGGTGGTACGAGGTGGTCGACGCCAGAGTGTGTCAATCTTTGATGTGGTGGTTGGTGACATTGCGTACTTGAAGATCGGTGATCAGGTTCCGGCTGATGGAGTGTTTTTGGAGGGGTATTCGTTGAAGGTGGACGAATCTAGCATGACGGGGGAGAGTGATCACGTGCATGTGAACGCTGACACGAACCCTTTCTTGTTATCTGGCACAAAGATCAGTGATGGTTTTGCATACATGATTGTCACTTCTGTGGGTATGAACACTGCATGGGGTGAAATGATGGGTTCGTTAGCGAGAGAGGTTAATGAGGAGACACCTTTGCAAGTGCGTCTTAATAAACTGACTTCTGCTATTGGCAAAGTTGGGTTGTTGGTGGCTGCACTTGTTTTGGTTGTATCTATGATACGTTACTTCACGGGCAGTACAAGAGATGATTTTGGGAACAGAGAATTCGTTGGGAGGAAGACCAAGTTTGATGATGTTATGAATGCGGTTGTCGGGATTGTTGCTGCGGCTGTGACAATTGTGGTGGTGGCCATTCCAGAAGGGTTGCCTCTGGCTGTTACTTTGACTCTGGCTTATTCCATGAAGAAAATGATGAGAGATAATGCCATGGTTAGGAGAATCTCTGCTTGTGAGACAATGGGGTCAGCAACAACAATCTGCACTGATAAAACAGGTACTCTTACGATGAATGAGATGCAGGTGACTGAGGTTTGGGTGGGGAACAGGGAAATAGCTGAAGGTGGGTATTTGGCGCCGAGTTTTGTGCAACTATTGAAAGAAGGAATTGGGTTGAATACTACTGGAAGCGTTTACCAGCCCCAAGAAACCTCACTGCCAGAAATTTCAGGTAGTCCAACTGAGAAAGCGTTGCTTTCTTGGGCTGTGGTGGATTTAGGGATGGACATTGATGTGGTGAAGCAGCATTGTGAAATCATTCACGTGGAGACGTTTAACTCTGAGAAAAAGAGAAGTGGGATTTTGATGAAGAATAGAGGGAGCAACAGGATCGTTACACATTGGAAGGGTGCTGCTGAGATGATATTGGCTATGTGTTCAAATTATTATGACCAGACAGGGGAAATCTTGATCTTGGATGATGAAGAAAGGGTTCAGATTGAGAAGATTGTGAAGGGCATGGCTACCAAAAGTTTGCGATGCATTGCCCTTGCCCAGAAGAGATCCAACGGGCAGCTCTGTGAAAAGCTTGAAGAGACAGAACTAACACTGTTGGGAATACTTGGATTGAAAGACCCTTGTAGGCCAGGAGTTGAAGCAGCAGTTGAATCATGCAGGAATGCTGGAGTGAAGATCAAGATGATTACAGGAGATAATGTGCATACAGCTAAGGCAATAGCCTCTGAATGCGGAATTCTTGATCCTAGTGAAGAATTGGATGAAGATGCTGTGGTTGAAGGGTTTCAATTCAGAAATTATTCTCACGAGGAAAGAATGGATAAGATTGACAGAATCAGAGTCATGGCCAGATCATCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCAGAAGGGTCATGTGGTGGCAGTCACAGGTGACGGCACAAATGACGCACCTGCTCTAAAAGAAGCAGATATTGGACTTTCCATGGGAATAGAAGGCACTGAAGTGGCAAAAGAGAGCTCAGATATTGTTATCCTTGATGACAATTTCTCTTCTGTGGTTACAGTAATCAGGTGGGGAAGATGTGTGTACAAAAACATTCAGAAGTTTATTCAGTTTCAGCTCACAGTGAATGTTGCTGCACTGGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTACAGCAGTCCAGCTTTTGTGGGTAAACCTGATAATGGATACTCTTGGAGCTTTGGCCTTAGCCACTGAGCAGCCTACTAATGATCTCATGAAGATGGCGCCTGTTGGTAGAGTTGAGCCACTTATAACTAGAGTTATGTGGAGAAACCTCATTTCACAGGCATTATACCAAGTTCTGGTGTTGCTGGTTTTACAATTCAGGGGAAGATCAATCTTTGATGTTACTGAGAAGGTGAAGAACACCCTTATTTTCAATGCTTTTGTCCTCTGCCAAGTGTTCAATGAGTTCAATGCAAGGGAGCTGGAGAAGAAGAACATATTTCAGGGACTTGGTAAGAATAGGTTGTTCATTGTAATTGTTGGCCTAACTGTTGCTCTTCAGGTGGTGATGGTTGAGTTTCTGAAGAAGTTTGCCAGTACTGAGAGATTGACTTTGGAGCAATGGGGTATCTGTGTTGGCATTGGAGCTTTGTCTTGGCCAATTGGTCTGCTGGTGAAGTGTATCCCAGTTGTTTGCAAGAAGTAG 2931 0.4463 MTCKKRWRMAFNAISFVKALSIQTPRLLRSLSYLAIDVQQHHVHSPRVKRFNVDNELLSHMVRDKTLESLTQFGGVEELAALLETDFKRGISDEKDDLDHRKRVFGVNVFAKPPCKGFFSFVLESFKDTTIIILLGCAMLSLGFGIKQHGWRDGWYDGGSIILAVILVIIVSSVSNFNQSRQFKKLSAKSENRGVEVVRGGRRQSVSIFDVVVGDIAYLKIGDQVPADGVFLEGYSLKVDESSMTGESDHVHVNADTNPFLLSGTKISDGFAYMIVTSVGMNTAWGEMMGSLAREVNEETPLQVRLNKLTSAIGKVGLLVAALVLVVSMIRYFTGSTRDDFGNREFVGRKTKFDDVMNAVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRRISACETMGSATTICTDKTGTLTMNEMQVTEVWVGNREIAEGGYLAPSFVQLLKEGIGLNTTGSVYQPQETSLPEISGSPTEKALLSWAVVDLGMDIDVVKQHCEIIHVETFNSEKKRSGILMKNRGSNRIVTHWKGAAEMILAMCSNYYDQTGEILILDDEERVQIEKIVKGMATKSLRCIALAQKRSNGQLCEKLEETELTLLGILGLKDPCRPGVEAAVESCRNAGVKIKMITGDNVHTAKAIASECGILDPSEELDEDAVVEGFQFRNYSHEERMDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFSSVVTVIRWGRCVYKNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEQPTNDLMKMAPVGRVEPLITRVMWRNLISQALYQVLVLLVLQFRGRSIFDVTEKVKNTLIFNAFVLCQVFNEFNARELEKKNIFQGLGKNRLFIVIVGLTVALQVVMVEFLKKFASTERLTLEQWGICVGIGALSWPIGLLVKCIPVVCKK* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3266 976 SUPERFAMILY HAD-like 415 820 IPR036412 -
Pvu2g3266 976 PANTHER CATION TRANSPORTING ATPASE 4 963 - -
Pvu2g3266 976 Pfam Cation transporter/ATPase, N-terminus 74 141 IPR004014 -
Pvu2g3266 976 PANTHER CALCIUM-TRANSPORTING ATPASE 4 963 - -
Pvu2g3266 976 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 686 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g3266 976 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 361 442 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g3266 976 Pfam Cation transporting ATPase, C-terminus 800 969 IPR006068 -
Pvu2g3266 976 Gene3D - 427 615 IPR023299 GO:0000166
Pvu2g3266 976 SMART Cation_ATPase_N_a_2 66 146 IPR004014 -
Pvu2g3266 976 SFLD p-type atpase 399 768 IPR044492 -
Pvu2g3266 976 Gene3D - 414 760 IPR023214 -
Pvu2g3266 976 Pfam E1-E2 ATPase 193 396 - -
Pvu2g3266 976 Gene3D - 124 961 - -
Pvu2g3266 976 ProSitePatterns E1-E2 ATPases phosphorylation site. 419 425 IPR018303 -
Pvu2g3266 976 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 423 620 IPR023299 GO:0000166
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 417 431 - -
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 608 619 - -
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 630 640 - -
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 715 734 - -
Pvu2g3266 976 PRINTS P-type cation-transporting ATPase superfamily signature 739 751 - -
Pvu2g3266 976 Gene3D - 96 293 - -
Pvu2g3266 976 SUPERFAMILY Calcium ATPase, transduction domain A 194 290 IPR008250 -
Pvu2g3266 976 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 64 972 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pvu2g3266 976 PRINTS H+-transporting ATPase (proton pump) signature 569 587 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g3266 976 PRINTS H+-transporting ATPase (proton pump) signature 715 731 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g3266 976 PRINTS H+-transporting ATPase (proton pump) signature 747 772 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g3266 976 Pfam haloacid dehalogenase-like hydrolase 414 729 - -
Pvu2g3266 976 SFLD Haloacid Dehalogenase 399 768 - -
Pvu2g3266 976 SUPERFAMILY Calcium ATPase, transmembrane domain M 73 974 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3266 Pvu-Chr2 47771930 47774860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3266 5 972 Primary Pumps ATPases AT3G22910 65.609 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3266 K01537 - gmx:100784119 1529.23