Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3262 ATGTCTACTTCAAAGAGCGTCAGCAGTTCTAGTGAAGATGACAATGAACTTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATTTGCTCTCCCAGTACATTTCTAATCACGGGGAAGGGCGATGGAACTTGCTGGCTAAACGTTCAGGATTAAAGAGAACTGGAAAAAGTTGCAGATTAAGGTGGCTAAATTATCTAAAACCAGATGTGAAACGGGGAAATTTGACCCCACAGGAACAACTTTTAATTCTTGAACTCCACTCAAAGTGGGGAAACAGGTGGTCAAAAATTGCACAACACTTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAGAACTAGGATTCAGAAACAAGCCAGACATTTGAAAATTGACACTGACAGCAGAGAATTTCAAGAGCTTGTAAGGCGTTTTTGGATGCCAAGATTGCTTCAGAAAGCAAAAGAGTCATCATCATCATCTTCTTCAGTCATGCCAATTCAGAACCAGGCAATTCCTTTGCTTCTTGATGATGGAGTTTCTCAACAGTCAACGGTTGGGAGCATACCATGGCAGGGACCTTGTATGAGTATGAATGGAGGTAGCTCCACTTATATGGAGCAACATGAGCAGAACTCAGACTCTGAACACAACAGTGGTTCATGCATCTCCTTTTCTGAGTCAGCAAATATTCCAAAAGTGTCTCAGCATTTTGGACACACCATGGACCAATTCCATGGCTTAAGCAACAATGAGTTTGGCAGTTTCTCATATGATGGTTACCATGTAAATGACAATGCCTATGAGATGAACACCTTCAAAACAACAACTGCAAGGGTGGCTCAGGATTTTCAGTACCCAGTTGGTGATTGTCAAACGGCAGCAACTGGTTGGCTAAGCAACGATTTTGCATGTACCATGTGGAACACGGATGAATTGTGGCAGTTTAGCAAGCTACAAAAACAAGACTTTTAG 960 0.4219 MSTSKSVSSSSEDDNELRRGPWTLEEDNLLSQYISNHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQKQARHLKIDTDSREFQELVRRFWMPRLLQKAKESSSSSSSVMPIQNQAIPLLLDDGVSQQSTVGSIPWQGPCMSMNGGSSTYMEQHEQNSDSEHNSGSCISFSESANIPKVSQHFGHTMDQFHGLSNNEFGSFSYDGYHVNDNAYEMNTFKTTTARVAQDFQYPVGDCQTAATGWLSNDFACTMWNTDELWQFSKLQKQDF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3262 319 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 4 311 - -
Pvu2g3262 319 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pvu2g3262 319 Gene3D - 19 71 - -
Pvu2g3262 319 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Pvu2g3262 319 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Pvu2g3262 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Pvu2g3262 319 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Pvu2g3262 319 SMART sant 71 119 IPR001005 -
Pvu2g3262 319 SMART sant 18 68 IPR001005 -
Pvu2g3262 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Pvu2g3262 319 Gene3D - 75 118 - -
Pvu2g3262 319 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 311 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pvu2g3262 319 CDD SANT 76 115 IPR001005 -
Pvu2g3262 319 CDD SANT 21 66 IPR001005 -
Pvu2g3262 319 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3262 Pvu-Chr2 47753298 47754920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3262 14 311 MYB Transcription Factor Family AT1G68320 46.815 7.28e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g3262 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3262 K09422 - gmx:778045 525.398