Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3257 ATGGAAGAAAACCTACCTCCTGGGTTCAGGTTCCATCCTACAGATGAAGAACTCATCACATATTATTTATTAAGGAAAGTCTCTGACATTAGCTTCACGTCCAAGGTTGTAGCAGTTGTTGATCTCAATAAATCTGAACCTTGGGACCTCCCAGGTAAGGCTTCGATGGGGGAGAAGGAATGGTATTTCTTCAGCTTGAAGGATCGGAAATATCCAACAGGGCTTCGAACGAACCGAGCGACGGAATCAGGGTATTGGAAAACCACAGGGAAAGATAAGGAGGTGTTTGGTGGTGGAGTTTTGATAGGGATGAAGAAAACTTTGGTGTTTTACATGGGTAGAGCTCCCAGGGGTGAGAAAAGTAACTGGGTTATGCATGAATACAGACTTCAAAACAAGCAACCCTATAGATCTTCTAAGGAAGAATGGGTGATTTGCAGAGTGTTCCAAAAGAGCTCAGCACCAAAGAAATCACAGCAGACATCATCTTCCCAACCATCTGAAGAGTCCCCTACCTCAATGGTCAATGAATTTGGTGATGCTGACCTACCAAATCTCAATGCAACCATTGCAAATTCATCTACTATTGCAGGACAACAAACTTACAACAATGGTGATCCCATAAATGTCAACACAAACATGAACTTGACCATGAATTGGCCTTCTGCAACTGACCTTCCATCTCTCCCATGGCCTTCTGGGTTACTGCTGAATCCAAATCTTTCTGTCAATTCACTGCTTCTCAGGGCATTGCAGCTTAGGAGTACTTATCATCATCAAAGAGAAGCTGCAACCAGTGATCATCACTTTGCAACATATGTTCCTCAAACGTTTCCTCACAATGATATTGGAACTGATAATCTCACTCCAAATCTCAGTGCCTCAGCTTCTTCCAGAGCTTTAGAATCTTGTGTGCTGCAGGAGCAACCATTCAATATGGACTCCATTTGGTGA 954 0.4308 MEENLPPGFRFHPTDEELITYYLLRKVSDISFTSKVVAVVDLNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEVFGGGVLIGMKKTLVFYMGRAPRGEKSNWVMHEYRLQNKQPYRSSKEEWVICRVFQKSSAPKKSQQTSSSQPSEESPTSMVNEFGDADLPNLNATIANSSTIAGQQTYNNGDPINVNTNMNLTMNWPSATDLPSLPWPSGLLLNPNLSVNSLLLRALQLRSTYHHQREAATSDHHFATYVPQTFPHNDIGTDNLTPNLSASASSRALESCVLQEQPFNMDSIW* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3257 317 PANTHER BNACNNG63190D PROTEIN 2 258 - -
Pvu2g3257 317 MobiDBLite consensus disorder prediction 154 181 - -
Pvu2g3257 317 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
Pvu2g3257 317 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Pvu2g3257 317 MobiDBLite consensus disorder prediction 154 174 - -
Pvu2g3257 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 258 - -
Pvu2g3257 317 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Pvu2g3257 317 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3257 Pvu-Chr2 47709913 47713332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3257 1 317 NAC Transcription Factor Family AT3G18400 55.556 4.19e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu2g3257 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3257 - - gmx:100775645 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3257 2 47709913 47713332 Pvu4g1659 4 43889426 43891660 PCT