Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3251 ATGCAAAAGTGTGAGATGGAATCGTTGAATGAAGTTTGTGAAGAAAGGAAACTGCGGATTTCATTTAGTGACCCAGATGCCACAGACAGTGAAGAAGAGAGTGAAGTAGGAAAAGGAGAGAGTAAGAGAAATGGTTCAAAGAGAGTTGTTGTAGAGATGAAGTTTCCAAGCATGGTAGAAGAAGCAAACAAAAATGCAGAGACAAAAGCAGAAAAAGGAAGCAGCAAGTCAAAAGGTGTAAGACTGAGACCATGGGGAAAATATGCAGCTGAGATACGAGTTCCTTTTGAAAATCGCAGAGTGTGGCTTGGTACTTTTGATACTGAGAAAGAGGCTTCAATGGCTTACAATAAAAAGAGGGAAGAGTTTGACAACAAAAAAGCTCTTCTAAAAGCAGATGCATCAGGCCATTCTAAGGTTGCCAAAATGGTTTTTCCTCATCTTCCTTCTCAATCATCTTAG 462 0.3983 MQKCEMESLNEVCEERKLRISFSDPDATDSEEESEVGKGESKRNGSKRVVVEMKFPSMVEEANKNAETKAEKGSSKSKGVRLRPWGKYAAEIRVPFENRRVWLGTFDTEKEASMAYNKKREEFDNKKALLKADASGHSKVAKMVFPHLPSQSS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3251 153 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 SUPERFAMILY DNA-binding domain 75 128 IPR016177 GO:0003677
Pvu2g3251 153 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 PANTHER OS01G0224100 PROTEIN 15 135 - -
Pvu2g3251 153 MobiDBLite consensus disorder prediction 20 80 - -
Pvu2g3251 153 MobiDBLite consensus disorder prediction 20 49 - -
Pvu2g3251 153 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 15 135 - -
Pvu2g3251 153 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 CDD AP2 75 117 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 Gene3D AP2/ERF domain 76 132 IPR036955 GO:0003700|GO:0006355
Pvu2g3251 153 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Pvu2g3251 153 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3251 Pvu-Chr2 47666399 47666860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3251 47 131 AP2-EREBP Transcription Factor Family AT1G49120 49.451 1.72e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g3251 AP2 4.4e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3251 - - vun:114178173 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1668 4 43964844 43965791 Pvu2g3251 2 47666399 47666860 PCT