Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3246 ATGAATGAAGGAAGCATGTCTGTTTCAATCCCTCTTCTCCTCCTTTCCACCTTCATAATAACATCCATTATCTCCTTCATCTTCCTGAGTCGAAACCGCACCAAACATCACCAGAGACACCCGCCAGGCCCACCGCCCTTCCCGGTCATCGGTAACCTCCACATGCTGGGGAAGCTCCCGCACCGCACGCTCCAGGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTGCGCCTCGGTCAGGTGCCAATCGTCGTCGTCTCCTCCTCCGAGGCCGCACAACACTTCCTGAAACCGCACGACGCCGTTTTCGCGAGCCGTCCAATACTGGAAGCGTCGAAGTACTTCGGCTACGGTTCGAAGGGGTTGGCGTTCTCGGAGTACGGCCCGTACTGGCGGCACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCGAAGGTGGAGTCCTTCGCGCCGCTGAGGAAGCGGGAGGTGGAGCTGGCAGTGAAGTTGGTGGAGGAACGCGCCGCAAGAGGGGAGGTGTTGGACCTTAGCAGAGTGGTGCACGACGTTGTGGAGGATATCGTGTACAAAATGGTGCTGGGGTGTAGCAAGCACGATGAGTTTGATTTGAAGGGGTTGATTCAGAACGGGATGAACATCGCTGGTGCGTTTAATATAACGGATTATGTGCCTTGGCTTCGTCCTTTGGATCTTCAGGGATTAAATCGAAGTTACAAGAAAATTAGTGCAGCACTTGACCAAGTGTTGGAAAAGATAATAAAGGAGCATGAACAGGGTTCAGATGTACAAAATGAAAAGCACCATAAGGACTTCATAGACATATTACTCTCGCTGAAGCACCAGCCTATCGATCCTCAGGATGAACAAAGCCATGTCATTGATGAAACTAACATCAAGGCTATACTTTTAGATATGATTGCTGGGGCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACATTATCCGAGCTCCTGAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATTTGGTTGGAAGGAACAAATTAGTGGAGGAAAATGATTTGGCCAAGTTAAAGTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCTGGACCATTAGTTCCAAGAGAATCAACAGAGGATGTTATAGTTGAGGGTTACTTCTTAGAGAAAAAATCAAGAATCATAATAAACTTATGGGCAATGGGAAGAGATTGTAATATATGGTCTGATAATGCTGAAGTGTTTTATCCAGAGAGATTCATCAATAACAATTTAGACTTCAGAGGATATGACCTCCAATATATACCATTTGGTTTTGGTCGAAGGGGATGCCCTGGAATACACCTAGGCTTAGCAACAGTTAAACTTGTTGTGGCTCAATTAGTACATTGTTTCAGTTGGGAACTTCCAGAAGGTATGACCCCAGATGAGTTGGATATGAATGAGAGATTTGGCCTCACAATACCAAGAGTCAAGCACTTGTTTGCTGTGCCAAGGAATCGTTTTCTCAGGGAATCTTGTAATGAATCAAAATGA 1554 0.4685 MNEGSMSVSIPLLLLSTFIITSIISFIFLSRNRTKHHQRHPPGPPPFPVIGNLHMLGKLPHRTLQALAQQYGPIMSLRLGQVPIVVVSSSEAAQHFLKPHDAVFASRPILEASKYFGYGSKGLAFSEYGPYWRHMRKVCTLQLLSASKVESFAPLRKREVELAVKLVEERAARGEVLDLSRVVHDVVEDIVYKMVLGCSKHDEFDLKGLIQNGMNIAGAFNITDYVPWLRPLDLQGLNRSYKKISAALDQVLEKIIKEHEQGSDVQNEKHHKDFIDILLSLKHQPIDPQDEQSHVIDETNIKAILLDMIAGAFETSATVVEWTLSELLRHPRVMKKLQDELDNLVGRNKLVEENDLAKLKYLDIVIKETLRLYPPGPLVPRESTEDVIVEGYFLEKKSRIIINLWAMGRDCNIWSDNAEVFYPERFINNNLDFRGYDLQYIPFGFGRRGCPGIHLGLATVKLVVAQLVHCFSWELPEGMTPDELDMNERFGLTIPRVKHLFAVPRNRFLRESCNESK* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3246 517 Coils Coil 234 254 - -
Pvu2g3246 517 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 508 - -
Pvu2g3246 517 Gene3D Cytochrome P450 26 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pvu2g3246 517 Coils Coil 334 354 - -
Pvu2g3246 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 508 - -
Pvu2g3246 517 SUPERFAMILY Cytochrome P450 33 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu2g3246 517 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3246 Pvu-Chr2 47613714 47616204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3246 13 508 Cytochrome P450 AT5G07990 41.061 6.92e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3246 - - gmx:100814172 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3246 2 47613714 47616204 Pvu4g1690 4 44148347 44150904 PCT
Pvu4g1685 4 44110918 44115650 Pvu2g3246 2 47613714 47616204 PCT