LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g3246	ATGAATGAAGGAAGCATGTCTGTTTCAATCCCTCTTCTCCTCCTTTCCACCTTCATAATAACATCCATTATCTCCTTCATCTTCCTGAGTCGAAACCGCACCAAACATCACCAGAGACACCCGCCAGGCCCACCGCCCTTCCCGGTCATCGGTAACCTCCACATGCTGGGGAAGCTCCCGCACCGCACGCTCCAGGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTGCGCCTCGGTCAGGTGCCAATCGTCGTCGTCTCCTCCTCCGAGGCCGCACAACACTTCCTGAAACCGCACGACGCCGTTTTCGCGAGCCGTCCAATACTGGAAGCGTCGAAGTACTTCGGCTACGGTTCGAAGGGGTTGGCGTTCTCGGAGTACGGCCCGTACTGGCGGCACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCGAAGGTGGAGTCCTTCGCGCCGCTGAGGAAGCGGGAGGTGGAGCTGGCAGTGAAGTTGGTGGAGGAACGCGCCGCAAGAGGGGAGGTGTTGGACCTTAGCAGAGTGGTGCACGACGTTGTGGAGGATATCGTGTACAAAATGGTGCTGGGGTGTAGCAAGCACGATGAGTTTGATTTGAAGGGGTTGATTCAGAACGGGATGAACATCGCTGGTGCGTTTAATATAACGGATTATGTGCCTTGGCTTCGTCCTTTGGATCTTCAGGGATTAAATCGAAGTTACAAGAAAATTAGTGCAGCACTTGACCAAGTGTTGGAAAAGATAATAAAGGAGCATGAACAGGGTTCAGATGTACAAAATGAAAAGCACCATAAGGACTTCATAGACATATTACTCTCGCTGAAGCACCAGCCTATCGATCCTCAGGATGAACAAAGCCATGTCATTGATGAAACTAACATCAAGGCTATACTTTTAGATATGATTGCTGGGGCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACATTATCCGAGCTCCTGAGGCATCCAAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATTTGGTTGGAAGGAACAAATTAGTGGAGGAAAATGATTTGGCCAAGTTAAAGTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCTGGACCATTAGTTCCAAGAGAATCAACAGAGGATGTTATAGTTGAGGGTTACTTCTTAGAGAAAAAATCAAGAATCATAATAAACTTATGGGCAATGGGAAGAGATTGTAATATATGGTCTGATAATGCTGAAGTGTTTTATCCAGAGAGATTCATCAATAACAATTTAGACTTCAGAGGATATGACCTCCAATATATACCATTTGGTTTTGGTCGAAGGGGATGCCCTGGAATACACCTAGGCTTAGCAACAGTTAAACTTGTTGTGGCTCAATTAGTACATTGTTTCAGTTGGGAACTTCCAGAAGGTATGACCCCAGATGAGTTGGATATGAATGAGAGATTTGGCCTCACAATACCAAGAGTCAAGCACTTGTTTGCTGTGCCAAGGAATCGTTTTCTCAGGGAATCTTGTAATGAATCAAAATGA	1554	0.4685	MNEGSMSVSIPLLLLSTFIITSIISFIFLSRNRTKHHQRHPPGPPPFPVIGNLHMLGKLPHRTLQALAQQYGPIMSLRLGQVPIVVVSSSEAAQHFLKPHDAVFASRPILEASKYFGYGSKGLAFSEYGPYWRHMRKVCTLQLLSASKVESFAPLRKREVELAVKLVEERAARGEVLDLSRVVHDVVEDIVYKMVLGCSKHDEFDLKGLIQNGMNIAGAFNITDYVPWLRPLDLQGLNRSYKKISAALDQVLEKIIKEHEQGSDVQNEKHHKDFIDILLSLKHQPIDPQDEQSHVIDETNIKAILLDMIAGAFETSATVVEWTLSELLRHPRVMKKLQDELDNLVGRNKLVEENDLAKLKYLDIVIKETLRLYPPGPLVPRESTEDVIVEGYFLEKKSRIIINLWAMGRDCNIWSDNAEVFYPERFINNNLDFRGYDLQYIPFGFGRRGCPGIHLGLATVKLVVAQLVHCFSWELPEGMTPDELDMNERFGLTIPRVKHLFAVPRNRFLRESCNESK*	518

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu2g3246	517	Coils	Coil	234	254	-	-
Pvu2g3246	517	PRINTS	P450 superfamily signature	311	328	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	P450 superfamily signature	364	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	P450 superfamily signature	441	450	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	68	87	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	92	113	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	300	317	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	320	346	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	363	381	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu2g3246	517	PRINTS	E-class P450 group I signature	440	450	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g3246	Pvu-Chr2	47613714	47616204	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g3246	13	508	Cytochrome P450	AT5G07990	41.061	6.92e-125	373

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g3246	-		-	gmx:100814172	796.578

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g3246	2	47613714	47616204	Pvu4g1690	4	44148347	44150904	PCT
	Pvu4g1685	4	44110918	44115650	Pvu2g3246	2	47613714	47616204	PCT

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