Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3236 ATGGCTAGTCGACTGAAGGAGGATGAGAAAAATGAACGAATAATTCGAGGACTTCTTAAACTCGCTCCGAATCGAAGATGTATTAACTGTAACAGTATGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTATGCACTAACTGTAGCGGAATACACCGAGAATTTACACATAGGGTAAAATCAATTTCAATGGCCAAATTTACTGCACAAGAAGTTGGTTCACTTCAAGAAGGTGGAAATCAGCGTGCAAAAGAAATCTATTTTAAAGAATGGGACCCACAACATCATTCTCTTCCCGATAGCAGCCATGTTGGCAGGCTCCGGGATTTCATCAAACACGTTTATGTGGATAGAAGATTCAGTGGTGAGAGGACCAATGATAAACCTCCAAGAGTAAAGGGCGACAAGGATGATTTCTATGAAAACAAGAGAACAGATACATATCAGGGTGGACCTAAAAGCCCTGCATATGAGGACCGTTTCAGCGATAGGTCTAGTCCTGGTGGAAGAAGTCCTGGATATGATCAAGAAAATGGGCAATATGGTGATTACAGAATAAGTCCTAGTCGTCCCGCTATAATCAATGACTGGCGTCGAGAAGAACGGTTTGGGGATGGACGAAAATATGAAGATCAGAGAATATCTGATGGAAATCATAAGGGGGAAAGCCATTCTCCTGATTCTTCCAGCCCCCCTGTGGTCCGACCTGTTAGAGAAATCTTGGGTGAAAATGTAGTACCTCTTCGAATAAGTGAACCACCCAAAACAAACAGTGGACAGGCTGCTAATGGCTCAACACTCACACAGAGAACTTCATCTTCCAGTACCTTAGCATCCAGCCATGTTACCCAGACAGAAGTTAAGCCGGAGACTATTAAGAGCCTTATTGATTTTGATGATGATCCTGAACCATCTGATGCTCCAGCAATTTCTCAAGCCCAGCAAACTGCTGTTGCTCAACTCGGGATGCCTGTAAATTCCAATGATAATAATTGGGCCTCTTTTGATTTTGCTCCTGAGGCAAAAACACCTCAGGGTCCTTCAAACGTAAATCCACTTGAATCCGTTCTGACACAATTGACTGTACCGGTATATGTACCTTCTCAGGTCTCTCAATCCCAAGGACCTTTGACGGGATCAACTCTTACTGCTACTGCTGCTGGAGGTACAATTGCTAGCAGCTTCTCAACATTCCCCAGTACTGGTGCTTCAGTAACATCTTTTGAAGTGACGACGGCATCAGCTCTCAATAATGCAGGACAATGGACTACTTTGCAGTATGAGCAACAACAACCTTTGTTCACTGCTGCTGCTAGTCAGCCTTCTATTCAACAAGCCACACCACCAGTTGGGGCAGCTTTGAATAATCAGCCCTGGGTTGTACCTTCTGTACCATCGGTTCAAGGGCATCCAAGCACATCAATACCCCATGCATCACACCTTGTCCCAAAGCCTGCAAATGATGCTATGTCCAGTGTTGCTTTACAACCTTCTGCAGTTGACATGAAACCAAGGGGAAGAAGTGAGCTTCCTGAGGATCTATTCGCAGTAAAATATCCATCCTTCCCTGCTCCAGTCCCAGGTTGGCAAATGGGTCTACCACCTAACATGGGTATCTCAATTCAATATAATAATGCAGTGCCCATGCCAGGTTTTCCACAAGCATCAAAGTCAATAAATCCATTTGACGTCAGTAACAATCCTACTCCAGTTCAAGTCCCAACATTTCCTTCCATGTCATCTCTACAAGGTGCTCTACCTAGTGTAACACCTTCAGCTACAATCCACCCTTCAAATATGGGTAATTCATCTCTTGCCTGGAATCCGTCATCCTATGTATTTGTGCCGCCTCCTCAAGCACAAACTAATGCACCCGTAATGAGACCAGGGGTGTATATGGGGCAACAAATGGCCACTAACATGCCAATGCCAAGGCATCAAGGATTTGGGAAGTTTGCGACTGAGGGAACTGCTTTTGGCTTCTCAAATCCAGATCAGCAGCTGAGTGATAGTAGGTTGTCAACTGCTGTTACCCCAAACACTTTCCAGTCAAGAGGAAACCCTTTCGGATGA 2079 0.4459 MASRLKEDEKNERIIRGLLKLAPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVGSLQEGGNQRAKEIYFKEWDPQHHSLPDSSHVGRLRDFIKHVYVDRRFSGERTNDKPPRVKGDKDDFYENKRTDTYQGGPKSPAYEDRFSDRSSPGGRSPGYDQENGQYGDYRISPSRPAIINDWRREERFGDGRKYEDQRISDGNHKGESHSPDSSSPPVVRPVREILGENVVPLRISEPPKTNSGQAANGSTLTQRTSSSSTLASSHVTQTEVKPETIKSLIDFDDDPEPSDAPAISQAQQTAVAQLGMPVNSNDNNWASFDFAPEAKTPQGPSNVNPLESVLTQLTVPVYVPSQVSQSQGPLTGSTLTATAAGGTIASSFSTFPSTGASVTSFEVTTASALNNAGQWTTLQYEQQQPLFTAAASQPSIQQATPPVGAALNNQPWVVPSVPSVQGHPSTSIPHASHLVPKPANDAMSSVALQPSAVDMKPRGRSELPEDLFAVKYPSFPAPVPGWQMGLPPNMGISIQYNNAVPMPGFPQASKSINPFDVSNNPTPVQVPTFPSMSSLQGALPSVTPSATIHPSNMGNSSLAWNPSSYVFVPPPQAQTNAPVMRPGVYMGQQMATNMPMPRHQGFGKFATEGTAFGFSNPDQQLSDSRLSTAVTPNTFQSRGNPFG* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3236 692 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pvu2g3236 692 MobiDBLite consensus disorder prediction 123 190 - -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 298 317 - -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 659 692 - -
Pvu2g3236 692 CDD ArfGap_AGFG 12 122 - -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 123 146 - -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 206 225 - -
Pvu2g3236 692 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Pvu2g3236 692 PANTHER ARFGAP/RECO-RELATED 1 692 IPR044820 GO:0005096
Pvu2g3236 692 MobiDBLite consensus disorder prediction 332 354 - -
Pvu2g3236 692 PANTHER ARF GTPASE ACTIVATOR 1 692 - -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 206 293 - -
Pvu2g3236 692 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pvu2g3236 692 MobiDBLite consensus disorder prediction 661 692 - -
Pvu2g3236 692 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Pvu2g3236 692 MobiDBLite consensus disorder prediction 253 292 - -
Pvu2g3236 692 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Pvu2g3236 692 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pvu2g3236 692 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pvu2g3236 692 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3236 Pvu-Chr2 47518824 47525383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3236 12 122 C2H2 Transcription Factor Family AT4G21160 35.043 2.83e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3236 - - vra:106765388 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3236 2 47518824 47525383 Pvu2g3236 2 47518824 47525383 ECH