Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3230 ATGGCTGCTCTTAACAATGGCGATTCTGCCTCCGTCAACAAGCTCCCGTCCGTCAAGTTCACCAAGCTTTTCATCAACGGAGAGTTTCAAGACTCTGTGTCAGGGAAGACATTTGAGAGCATAGATCCAAGAACAGGTGATGTAATAGCGAGAATCAGTGAAGGAGACAAAGAAGACGTAGACATTGCCGTTAGAGCAGCACGTTACGCGTTTGACTTTGGTCCTTGGCCACGCATGTCTGGCGCTGATAGAGGTAAAATATTGATGAAATGGGCGGAACTAATTGATGAACACGCAGAAGAACTTGCAACACTAGATGCCATTGATGCGGGGAAGTTGTACCATATATGTAAGAATTTGGAAGTTCCAGCAGCGGCAAACACTCTACGTTACTATGCAGGTGCCGCCGATAAAGTTCATGGAGAGGTCTTGAAAATGTCTCGACAGTTCCATGCGTACACATTACTGGAACCAGTTGGGGTTGTGGGACACATAACTCCTTGGAATTTTCCCAATACCATGTTTTATATTAAGGTTGCTCCTTCTTTAGCTGCTGGTTGCACCATGGTCGTCAAGCCTGCTGAGCAAACACCCCTCTCAGCTTTGTATAATGCTCATCTTGCTAAATTGGCTGGAATTCCAGATGGAGTGGTCAATGTAGTGACAGGATTTGGCCCAACTGCTGGTGCTGCATTAAGCTCACACATGGATGTTGATAAGGTCAGCTTTACTGGTTCAACCCAAACGGGTCGTGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCACCGCTCATAATTTTTGACGATGCTGATATAGACAAAGCTGTTGAGCTTGCTTTAATTGGCATCCTATATAACAAGGGAGAAGTTTGTGTAGCAAGTTCTCGTGTATTTGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGGTGGAGAAGGCAAAAGCTTGGGTGGTTGGAGATCCTTTTGATCCTAAAGTCCAACAAGGACCACAGGTTGACAAGGAACAATTTGAGAAGATTCTTTCGTATATTGAGCATGGAAAGAGAGAAGGAGCAACCCTTTTGACTGGAGGTAAAACAGTGGGCAACAAGGGCTACTTCATTGAGCCAACAATTTTCTCTGATATAAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTCAAGACGATTGATGAAGCAATTAAAAGTGCTAATAATACTAAGTATGGCTTAGCAGCAGGCATAGTGACCAAGAATTTGGATACAGCAAATACTCTGTCAAGGTCGATTCGTGCAGGTACCGTTTGGATCAATTGCTACTTAGCCTTTGGCGATGATGTTCCCTTTGGAGGGTACAAGATGAGTGGATTTGGAAAAGACCATGGATTGGAAGCCCTTCACAAATACTTGCAAGTTAAATCTGTTGTAACTCCTCTTTACAATTCTCCTTGGCTTTGA 1506 0.4329 MAALNNGDSASVNKLPSVKFTKLFINGEFQDSVSGKTFESIDPRTGDVIARISEGDKEDVDIAVRAARYAFDFGPWPRMSGADRGKILMKWAELIDEHAEELATLDAIDAGKLYHICKNLEVPAAANTLRYYAGAADKVHGEVLKMSRQFHAYTLLEPVGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVVKPAEQTPLSALYNAHLAKLAGIPDGVVNVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAVELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKREGATLLTGGKTVGNKGYFIEPTIFSDIKEDMLIAQDEIFGPVMALKKFKTIDEAIKSANNTKYGLAAGIVTKNLDTANTLSRSIRAGTVWINCYLAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3230 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Pvu2g3230 501 SUPERFAMILY ALDH-like 14 497 IPR016161 GO:0016491
Pvu2g3230 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Pvu2g3230 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Pvu2g3230 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 501 - -
Pvu2g3230 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Pvu2g3230 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Pvu2g3230 501 Pfam Aldehyde dehydrogenase family 32 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3230 Pvu-Chr2 47469524 47474952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3230 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.259 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3230 K12355 - gmx:100811540 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3230 2 47469524 47474952 Pvu4g1718 4 44444006 44447858 PCT