Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3215 ATGTATAGATCATTTCTGAAATGTGATGATCCAAAAGGAGTTATAGGATGTGGGACAATCAGGAAATACAGGACTCGTTCTCACAAAGTGAAGGACAAGACAAAAACGCAGAAGACATGTGAAATAATGGAGACATCCTTGATCAATAAAAGATACAAAGAGGAGAAGAAGGTTGCCAAAGAAGGCCTTGGAAATCTCATTGGCCCATCATCTTTGCAGCTCACAGAGGTCTCCGAAGAGGATCGTAGTTGGAACAACATGCTAGATTCATGGTCTAGAGATATTATAGGTGAAGGAAAGTCCGAAGATATTGCAAAAGATATTTTAAAAGGAGCTCTTGATCTGCAAGATTCTCTAAGCATGATACGCAAGTTGCAAGAGGAGGCCTCACAGCATACAGCTCTTTTTGGGAGAAAACATACTACGAAATCAGAAAGAGACAGAATTGATGGAAGCAAGATTGGTAGAAGGCAAGCTAATCTATTTGGGGAACAAAGTAATGCAAAGGGGTTTCAAAGACCACAGCCTTCTGCAGGTGGTTCTTCAAGTAACTGCAAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAGTATGTTTCCAGAGACCACTGAAGGATTTGATTCAGGTTTAGAAACTTTTTCTATAAGCACAAGCCAATGTTCTGGGGTCAGGACTAACAACAGTCTTTCTGATCCTTCTTTATCAGCAATAGCTTCAAAGATTGAAAGAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAGGAAGGCCCCTCAAAATCATTTGCAGCTGTTAAGCAAAAACTGTTGGATTGTGAGATAGATATGTCAAAGGTCAGAAAGAATGATTCTATACCTGAGAGGGTTAATCCAGAACAAAGAGCCCTGAGGGAAACTCTTGACACTATGCATTTCAAAGGTATTTTGAAGGAGAGTTTTGTCAAAGATTCTAAGCTTCATGTGCATCATTTCAATGATACCAGTTCCAAGCAGTTTGTTGATTTATCTCACATTGCACTAATGAAACCTCAATGTACTCTATACCAGCAATCAGAAAAAAGTACCTATATTCCAGTTCTTCCAAAAGAGTTAACAAAACTGAGAGGAGAAATATCCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGAAATGGAAACGGGTATCAGGAAACGGCTTAACAAAGTGGAAGGACCTAAATTTCACAAAGAGGTTATTAAACTGGATGCAAAAGGAAGCAATCCTGTTGAAGAATATTCAGGTAAGGTAAAACTATATTGTCACATTGGTCACACGTCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTAGATCCCATTGGTAGAAAACAGCCAGAAAATGATATCTCACAACCTACAATTGTGGCAAAACATCAATACCAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGTGGATCCAGAATCGACAAGGATGAGATTTCCTGCCTAAAGAGTACAAGCTCAAACAACATCTCCACTCAAAAAACTAAGAATACCAAGGACGTTAATGTTGAGACTAAAAAAATTAATTCCATGGTAGATTCTTTAACAGGTAGAAAGAATCAGATGAAAAAACAAAGTCCTGTTGCTGAGCCAGAACCAGCTAAACTAACTGTTGAACAAATCAGGCAGAGAGAAAAGAAGAAAAATTACCCTGAGATTAGAATCTCCACTAGACTAGAAGATGAGCTCCTGATGGTGTGTGAAGCAGATGGCTTCATAAATAATATTGGAGAAAAATGCAAGCTGAGGAAGAGTTCTTCAGGCGATGAGCTCATTATGGCGCTCAAATCTGAACATAAAAATGATGCTATCACTGCTTACAGCATTGACGCTGACAAAGAAGGCACAGAGCTGAAACATTTTCTTCTAACGAGTCCATCATTCATAGGACATACAAAGAAGCTCTTCAATCTTGATGTGGATTGTCCCAACACCCCACAAAAGGATGAAACTATTTCAAGCAGGGCCAATACGAGGCTTTATTTGGATTGCGCATACGAACTCACTGAACGTAAAAGTCTTCAAGACTCTCAAGTGGTTCCTTCTCTCTTGCCACCATGTGGGGGGAACTCAACACTACACATCTCCTTAGACAGGTTGGTGGAAGAAATCTGTGATGGCATTGAGAATCTAAAATTTTACAGAGAAGATTATGATTCTTGGGAGGAAGATTTTGCAGACAATGACGTGTTTGCAATGATGGAGAAAGACATGAAGTGCAACGGAGAGATTAATGGAATCTGGGAGAGTGGTTGGAGGACAGGCTTTTGTGCAGATGAAGCTCAACTAGTTGTCAATAAAATACAGAGCATGCTTATAAGTGGATTAATTGAGGAGCTTGTTATAGATTTATCAGCTTAA 2430 0.3926 MYRSFLKCDDPKGVIGCGTIRKYRTRSHKVKDKTKTQKTCEIMETSLINKRYKEEKKVAKEGLGNLIGPSSLQLTEVSEEDRSWNNMLDSWSRDIIGEGKSEDIAKDILKGALDLQDSLSMIRKLQEEASQHTALFGRKHTTKSERDRIDGSKIGRRQANLFGEQSNAKGFQRPQPSAGGSSSNCKEELKKVIKESLVRQSMFPETTEGFDSGLETFSISTSQCSGVRTNNSLSDPSLSAIASKIERGPSLVFKLMGLEEGPSKSFAAVKQKLLDCEIDMSKVRKNDSIPERVNPEQRALRETLDTMHFKGILKESFVKDSKLHVHHFNDTSSKQFVDLSHIALMKPQCTLYQQSEKSTYIPVLPKELTKLRGEISSSKTIKHRKGSSSTNMGKEMETGIRKRLNKVEGPKFHKEVIKLDAKGSNPVEEYSGKVKLYCHIGHTSHVNETIDRKWKVDPIGRKQPENDISQPTIVAKHQYQREIPSTKLRKLKSGSRIDKDEISCLKSTSSNNISTQKTKNTKDVNVETKKINSMVDSLTGRKNQMKKQSPVAEPEPAKLTVEQIRQREKKKNYPEIRISTRLEDELLMVCEADGFINNIGEKCKLRKSSSGDELIMALKSEHKNDAITAYSIDADKEGTELKHFLLTSPSFIGHTKKLFNLDVDCPNTPQKDETISSRANTRLYLDCAYELTERKSLQDSQVVPSLLPPCGGNSTLHISLDRLVEEICDGIENLKFYREDYDSWEEDFADNDVFAMMEKDMKCNGEINGIWESGWRTGFCADEAQLVVNKIQSMLISGLIEELVIDLSA* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3215 809 MobiDBLite consensus disorder prediction 161 186 - -
Pvu2g3215 809 PANTHER OS01G0228800 PROTEIN-RELATED 1 805 - -
Pvu2g3215 809 MobiDBLite consensus disorder prediction 375 397 - -
Pvu2g3215 809 PANTHER OS01G0228800 PROTEIN 1 805 - -
Pvu2g3215 809 MobiDBLite consensus disorder prediction 161 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3215 Pvu-Chr2 47354309 47358009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3215 626 804 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.720 3.86e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3215 - - var:108346558 1300.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3215 2 47354309 47358009 Pvu2g3215 2 47354309 47358009 ECH
Pvu2g3215 2 47354309 47358009 Pvu4g1746 4 44679381 44683522 PCT