Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3211 AAACCAGAATCTCCAAAGTCGAGACCGAGGCCTGGCTTTGAAATTAAAGAAGCAACTCCCAAGAAGCAAAAGCAGTGCAATTGTAAACATTCAAAATGCTTGAAGCTATATTGTGAATGTTTTGCTTCGGGAATATATTGTGAGGGTTGCAACTGTGTAAATTGCTATAACAATGTGGAAAATGAAGCTGCAAGACGAGAAGCGGTGGAAGCTACTTTGGAACGCAATCCAAATGCGTTCAGGCCGAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGGGAAATTTTGATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGTAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAACAACAACATGGTGTATATTCAGCAGGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTTTTCATCACCACCAATATCAAAGAAAAGAAAAGGTCAAGAACTCTTATTTGGGTCAGCCATCAAGGATCCATCACTTGGCAGGCTGGGACAACAGGCAAACAATGTCAGAGTCCCTGCACCGTCCTCATCCTTGTCACCTATTCCAGGTGCCCGTGTTGGACCATCAACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAACACCTGAAGGAACTTTGCTCAGTTTTGGTGCTAGTATCGGGACAAGCCGCAAAGACATTTACAGACCAGAAAAATTTAATGGATAAGCATGGAGAAGATCACACAGAAACTTCTCTTGCTTCTTCAACTCAAGAGCAATTACCAAACCAAAAGGAAGCTAATGTTGAGAAACCTATGGCTGATGATGATTGTTTGAGTGCAAACCAGACAGATAAAATCAGCCCAGAAAATTCTTGTTCAGATGGTGCTGATGTCCCAAAAGGGAGGCCAATGTCTCCTGGAACCTTAGCATTGATGTGCGATGAGCAAGACACAATGTTCATGACTTCTGCCTCCCCTATTGGATCAAGGGCGCATGCCTGCAACACATCTTCACAACCGCAATATGGACAAGGAATGACAGAGGTCTATGCCGAGCAAGAAAGGATTGTATTGACAAAATTTAGAGACTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCTAGAAGTGAATTAGAGAGTCAAAAGGAACCAAATAACAATTGCACTGGAAATGCCAGTACTACTGAGACAGATCATCAGCAGGGAACCACTAATAATGGTGTTGCCAAAGCTGCGGGCAGCATTACTTCTACATCTTCGTTCCCTGGTGGTAGTCTTATTCCTGAAAAATAG 1452 0.427 KPESPKSRPRPGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCEGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGFSSPPISKKRKGQELLFGSAIKDPSLGRLGQQANNVRVPAPSSSLSPIPGARVGPSTLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTFTDQKNLMDKHGEDHTETSLASSTQEQLPNQKEANVEKPMADDDCLSANQTDKISPENSCSDGADVPKGRPMSPGTLALMCDEQDTMFMTSASPIGSRAHACNTSSQPQYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKEPNNNCTGNASTTETDHQQGTTNNGVAKAAGSITSTSSFPGGSLIPEK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3211 483 MobiDBLite consensus disorder prediction 280 347 - -
Pvu2g3211 483 ProSiteProfiles CRC domain profile. 22 146 IPR005172 -
Pvu2g3211 483 MobiDBLite consensus disorder prediction 294 308 - -
Pvu2g3211 483 MobiDBLite consensus disorder prediction 428 477 - -
Pvu2g3211 483 PANTHER TESMIN/TSO1-RELATED 1 460 IPR028307 -
Pvu2g3211 483 SMART CXC_2 106 147 IPR033467 -
Pvu2g3211 483 SMART CXC_2 21 61 IPR033467 -
Pvu2g3211 483 Coils Coil 56 76 - -
Pvu2g3211 483 MobiDBLite consensus disorder prediction 428 483 - -
Pvu2g3211 483 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 109 143 IPR005172 -
Pvu2g3211 483 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 23 58 IPR005172 -
Pvu2g3211 483 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3211 Pvu-Chr2 47326699 47332512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3211 2 432 CPP Transcription Factor Family AT4G29000 65.367 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pvu2g3211 TCR 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3211 - - gmx:100786353 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3211 2 47326699 47332512 Pvu2g3211 2 47326699 47332512 ECH