Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3206 ATGAATAGAGCTGTCTTGCAAAGCTCACCGGTGCAACAAATGATGGCTGCAAACCCTAACAACTGGTGGAACATCAACACCATGCGTCCTCCTCCTCCTCCTCCTTCTCAAGATTCTTCTCCTTTCTTCTCCACTCCTTCCAGCTTTCTAACTCCACATAACCCCTCTTCTTCTCTTCCTCTCCCTTCTTGGCATGATAACAATAAAGAGCTACCAGAGTCATGGAGCCAGCTACTCATGAGTGGGATGGTGTCTGAAGAAGAGAAAGGGGCTATGTGCCAGGTTGAGTCAAAGAAGTTGGAGAACTGGGAGCAACAAATGCTGAGTCAGGCTTCAAGGGCTGCTATGGTTGATGTTAAGCAAGAAGGGTCGGTGAACAGCTATGTGTACGGTCATGGAAACGAAGAGTTTCACCCACCAAAGCCAACTTGGTCTCAAATAGTGCCTGCTTCTTCACCCAAATCATGTGTAACAAGTTTCAGCAGCAGCATGTTGGATTTCTCTAACAATAACACAGATGCTAGGCCTCCTCCACTAGACCAATCATCAGAGTGTAATAGCAGTGCAGCTGGTGGGGCATTCAAGAAAGCTAGGGTTCAACCGCCCACAACGCAGACGACCTTCAAGGTTAGGAAGGAGAAATTAGGTGACAAAATTACAGCCCTTCATCAACTCGTTTCCCCGTTTGGAAAGACTGACACAGCGTCTGTCTTATTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCACTGGATCAGGAAACATCAGGCACCAACAATCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCCGGTCAGTTGCTGAATGAAAACTGTTTGAAGAGGAAAGCAACTAGTGAGCAGCAGGATTCTGAAGAAGAGGCAAAGAAGGACCTAAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCTTTTGGAGGAGGGTTTCGGTAG 1044 0.4674 MNRAVLQSSPVQQMMAANPNNWWNINTMRPPPPPPSQDSSPFFSTPSSFLTPHNPSSSLPLPSWHDNNKELPESWSQLLMSGMVSEEEKGAMCQVESKKLENWEQQMLSQASRAAMVDVKQEGSVNSYVYGHGNEEFHPPKPTWSQIVPASSPKSCVTSFSSSMLDFSNNNTDARPPPLDQSSECNSSAAGGAFKKARVQPPTTQTTFKVRKEKLGDKITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTGSGNIRHQQSVQGEKNCIFPEDPGQLLNENCLKRKATSEQQDSEEEAKKDLRSRGLCLVPVSCTLQVGSENGADYWAPAFGGGFR* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3206 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 248 IPR011598 GO:0046983
Pvu2g3206 347 MobiDBLite consensus disorder prediction 41 65 - -
Pvu2g3206 347 Gene3D - 206 258 IPR036638 GO:0046983
Pvu2g3206 347 MobiDBLite consensus disorder prediction 168 189 - -
Pvu2g3206 347 CDD bHLH_AtbHLH_like 207 256 IPR045239 -
Pvu2g3206 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 259 IPR036638 GO:0046983
Pvu2g3206 347 MobiDBLite consensus disorder prediction 168 204 - -
Pvu2g3206 347 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 333 - -
Pvu2g3206 347 MobiDBLite consensus disorder prediction 26 40 - -
Pvu2g3206 347 PANTHER OS05G0228400 PROTEIN 17 333 - -
Pvu2g3206 347 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3206 Pvu-Chr2 47298494 47302270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3206 1 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.682 1.36e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3206 - - gmx:100785156 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3206 2 47298494 47302270 Pvu2g3206 2 47298494 47302270 ECH
Pvu2g3206 2 47298494 47302270 Pvu4g1758 4 44824929 44829812 PCT