Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3204 ATGTCTGAGGCATTGGAAGAGGTTCCTTCAATGAAAGGAGGGTGTGAAGAAGGGTTGAACCTCAAGGCCACCGAGCTGAGACTTGGGTTGCCTGGGTGTGAGTCACCTGAGAGGGAGGGTGTGTTTAAGACTGTGGTGGTGTCTGGGGCCAAGAGGGGTTTCTCTGATGCCATTGATGGAGGTTCTGGAAACTGGAATGGTGGATCTGAAGTGGGTTTGGGGAAAGATGCTTCCTTGTTCTCTCCTAGGGGAACTGTTAGTGCTGCCAAGTCTCTCACTCTCACTGCAATAGACTGCACCAACCAACCAACTGCTTTGGGTGCTTCTGTTCTCAAGGAAACTGTTCCACACTCTCCAAAACCATTGCATGAGAAGAAGCCTCAGATTTCTGCTCCGGCTGCAAAGGCACAAGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCAATGGCTTCTCAGCCTCAGAAGAATGATGATGCTGAGGCAGAAGCCAAGTCTGAATGCCTTTATGTTAAAGTCAGCATGGAAGGCGCCCCATACTTGAGGAAAGTGGATCTTAATAGTTTTGGCACTTACAAGGAACTCTCTTTGGCACTTGAAAAGATGTTTAGTTGTTTTACAATCAGTCAATGTGGCTCTTATGGGGTTTCTTCTGGTCGAGAAAATTTAAGTGAAAGTAGATTGATGGATCTTCTTCATGGTTCAGAATATGTTCTTACCTATGAAGACAGGGATGGAGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGAGTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCTCCTAGGGCCGTGGAAAAGTGCAAAAGTCGCAACTAG 876 0.4692 MSEALEEVPSMKGGCEEGLNLKATELRLGLPGCESPEREGVFKTVVVSGAKRGFSDAIDGGSGNWNGGSEVGLGKDASLFSPRGTVSAAKSLTLTAIDCTNQPTALGASVLKETVPHSPKPLHEKKPQISAPAAKAQVVGWPPIRSFRKNSMASQPQKNDDAEAEAKSECLYVKVSMEGAPYLRKVDLNSFGTYKELSLALEKMFSCFTISQCGSYGVSSGRENLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAVEKCKSRN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3204 291 SUPERFAMILY CAD & PB1 domains 167 272 - -
Pvu2g3204 291 PANTHER AUXIN-INDUCED PROTEIN 8 284 - -
Pvu2g3204 291 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 284 IPR003311 GO:0005634|GO:0006355
Pvu2g3204 291 Pfam AUX/IAA family 24 282 IPR033389 -
Pvu2g3204 291 ProSiteProfiles PB1 domain profile. 170 273 IPR000270 GO:0005515
Pvu2g3204 291 Gene3D - 164 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3204 Pvu-Chr2 47261835 47264779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3204 173 281 B3 DNA Binding Superfamily AT4G23980 31.193 1.35e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pvu2g3204 AUX_IAA 3.8e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3204 K14484 - gmx:100778529 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3204 2 47261835 47264779 Pvu4g1759 4 44862449 44865654 PCT