Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3195 ATGGTGAGAGTGGTTCTCATGGCTTCTTCGATTCGACCCACTCTCTCCTCTCTCACCATCTCTCCACCTTCCTCTCTTCCTCTCTTCAACCCTTCTCCCCGTCTCTCTTTCTCTGTGTCTCGGTACCATAGTTTTGGCCTGAAGGCTTCCAGAGTGCTGAGACAAGATGGTAATCCCGTGAGAGTCATGGCGTCAGGGGACGTGTCTCAATCTGTCGCGGCTGCATCACCGGAAAATGTGCTTGAGTGGGTCAAGCAGGACAATCGAAGAATGCTTCACGTTGTGTATCGAGTTGGGGACTTGGACAGGACCATAAAGTTTTATACGGAGTGTCTTGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAAGACTCACACTTTGTTATTGAACTGACATATAATTATGGAGTTGACAAGTATGATATTGGAACTGCATTTGGCCATTTTGGTATTGCCGTTGATGATGTTGTAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGTAAAATAACTAGAGAGCCTGGTCCTGTAAAGGGAGGGCGTTCAGTAATTGCATTTGTTGAAGACCCCGATGGTTACAAATTTGAACTTATAGAAAGAGGTCCAACTCCTGAACCCTTGTGCCAAGTAATGCTCCGAGTGGGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCATTTGGTATGGAGCTGCTTCGTACTCGAGACAATCCAGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATACGATAAAGGAAATGCTTATGCTCAAATTGCAGTAGGCACAGATGATGTGTACAAAACTGCAGAAGCGATTAAACTATCTGGAGGAAAGATTACTCGTGAACCTGGACCATTACCTGGTATCAACACCAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1059 0.44 MVRVVLMASSIRPTLSSLTISPPSSLPLFNPSPRLSFSVSRYHSFGLKASRVLRQDGNPVRVMASGDVSQSVAAASPENVLEWVKQDNRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDVVKAVELIRAKGGKITREPGPVKGGRSVIAFVEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAVGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3195 352 PANTHER LACTOYLGLUTATHIONE LYASE 35 352 - -
Pvu2g3195 352 ProSitePatterns Glyoxalase I signature 1. 93 114 IPR018146 GO:0004462|GO:0046872
Pvu2g3195 352 CDD GlxI_Ni 91 212 - -
Pvu2g3195 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 220 344 IPR037523 -
Pvu2g3195 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 90 214 IPR037523 -
Pvu2g3195 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 89 219 IPR029068 -
Pvu2g3195 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 91 211 IPR004360 -
Pvu2g3195 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 223 338 IPR004360 -
Pvu2g3195 352 ProSitePatterns Glyoxalase I signature 2. 157 169 IPR018146 GO:0004462|GO:0046872
Pvu2g3195 352 ProSitePatterns Glyoxalase I signature 1. 223 244 IPR018146 GO:0004462|GO:0046872
Pvu2g3195 352 CDD GlxI_Ni 221 342 - -
Pvu2g3195 352 Gene3D - 62 215 IPR029068 -
Pvu2g3195 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 221 342 IPR029068 -
Pvu2g3195 352 Gene3D - 217 352 IPR029068 -
Pvu2g3195 352 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 35 352 - -
Pvu2g3195 352 TIGRFAM glyox_I: lactoylglutathione lyase 78 223 IPR004361 GO:0004462|GO:0046872
Pvu2g3195 352 TIGRFAM glyox_I: lactoylglutathione lyase 221 344 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3195 Pvu-Chr2 47210613 47214578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3195 223 341 Calmodulin-binding Proteins AT1G08110 28.966 9.91e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3195 K01759 - gmx:100780463 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3195 2 47210613 47214578 Pvu2g3195 2 47210613 47214578 ECH
Pvu2g3195 2 47210613 47214578 Pvu4g1787 4 45054544 45058123 PCT