Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3190 ATGGCTGAGCAACCTAGCTCAGAAGCATCGTCGTCTGCTTCCACTGGCAAGCACTCCTCGTCGGAGGCCCATTTGGAAGGACCGGATCAAAAAAGGCCCAAGCAGGCCCGAGATAGCAGTAGCAAGCACCCCGTATACAGAGGGGTACGAATGCGCTCCTGGGGGAAGTGGGTGTCCGAAATCCGCGAGCCCAGGAAGAAGAACCGGATCTGGCTCGGCACCTTCGCCACCGCCGAGATGGCAGCGCGTGCGCACGACGTTGCGGCGCTCGCCATCAAAGGCAACTCCGCCATTCTCAACTTCCCCGAGCTCGCGGGCTCCCTGCCCCGGCCAGACTCCAACTCGCCGAGGGACGTTCAGGCGGCGGCGGCGAAGGCCGCCGCCATGGAGGTGATGGATCCCCCGACGACTCCATCGTGGACGCTGTCGCAGTGTTCGTCCTCGTCGTCGTTGGCGGGTAGTTCGTCGTCGGGGGAGGCGTCGACGGCGGAGGATCTGGGGGAGATAGTGGAGCTGCCGAGTCTGGGGACGAGTTTGGAAATACCGGAGCGGAGTGAGGAGGTGGTGTTTGTGGAGCCGGTGGACGGGTGGCTGTATTCGGAGGCGTGGTGTGACGGCATTTATGATGAAAGGGAGTGTGGGGGTTATTTCATTGGAGATGAGATTTCAATGCGGGAGTCAGAGAGCATGATTCTTTGTGGCTTTGAGGGTTCCTTGTGGCAGCATTAA 729 0.6091 MAEQPSSEASSSASTGKHSSSEAHLEGPDQKRPKQARDSSSKHPVYRGVRMRSWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELAGSLPRPDSNSPRDVQAAAAKAAAMEVMDPPTTPSWTLSQCSSSSSLAGSSSSGEASTAEDLGEIVELPSLGTSLEIPERSEEVVFVEPVDGWLYSEAWCDGIYDERECGGYFIGDEISMRESESMILCGFEGSLWQH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3190 242 MobiDBLite consensus disorder prediction 1 46 - -
Pvu2g3190 242 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Pvu2g3190 242 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Pvu2g3190 242 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Pvu2g3190 242 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Pvu2g3190 242 CDD AP2 46 104 IPR001471 GO:0003700|GO:0006355
Pvu2g3190 242 MobiDBLite consensus disorder prediction 1 21 - -
Pvu2g3190 242 MobiDBLite consensus disorder prediction 22 45 - -
Pvu2g3190 242 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Pvu2g3190 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 241 - -
Pvu2g3190 242 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Pvu2g3190 242 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 7 241 - -
Pvu2g3190 242 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3190 Pvu-Chr2 47177131 47178333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3190 11 208 AP2-EREBP Transcription Factor Family AT5G25810 55.779 3.05e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g3190 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3190 K09286 - gmx:100778201 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3190 2 47177131 47178333 Pvu2g3190 2 47177131 47178333 ECH
Pvu2g3190 2 47177131 47178333 Pvu4g1795 4 45126736 45127899 PCT