Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3184 ATGGAGGGACACGGGTGCTCAAAATATTTTGGATTTTCTGGCTGCTGTGGCGGTGATAAGAGGAAAATATCAGAGAAAGTTGTATTGCGTGTAAACTCACAGGTTAGTCAAAATAATAATATCCACAGCACCGGTGAAGAAGAAGAGGGAGAAGAGAAGAAAGTGATTGGAAGGAATATGGAGAGCACACTGAAGTCATTGAGAGATGGAGAGTCAGTGTTGGACCTCAGCCCCAGATCCACCGTCAGCGGCGGCGTTGAGGATGTCTACGGCGAGGATCGCGCCACCGAGGACCAACTTGTCACCCCATGGACTTTCTCAGTTGCCAGTGGTTACTCTCTGCTAAGGGATCCACAGTACAACAAAGGGCTAGCTTTCACTGAGAAAGAGAGGGATGCACACTATTTGCGTGGGCTTCTACCTCCCACTGTCAGCAATCAGTCACTTCAGGAGAAGAAGCTGATGCACAACATCAGGCAATATCAGGTTCCCTTGCAAAAGTACGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTCATTGATAATGTCGAGGAATTGCTCCCAGTTGTATATACTCCTACTGTTGGTGAGGCTTGCCAGAAATATGGGAGCATATTCAGGCGACCTCAGGGTCTTTACATTAGTTTGAAAGAAAAGGGTAAAATCCTTGAGGTTTTGAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGAGAATTTTGGGACTTGGAGATCTTGGATGTCAGGGGATGGGGATTCCTGTTGGTAAATTGGCTTTGTACACGGCACTAGGAGGAGTTCGTCCTTCAGCTTGTTTGCCTGTCACTATCGATGTGGGGACAAATAATGAGAAATTACTGAACGATGAATTTTACATTGGGCTTAGGCAAAATAGGGCAACTGGGCAGGAATATTATGAACTTCTGCATGAGTTCATGACTGCTGTGAAGCAAAACTACGGAGAAAAAGTTCTTGTACAGTTTGAAGACTTTGCAAATCACAATGCTTTTGAGTTGCTTGCTAAGTATGGTACAACTCATCTTGTTTTCAATGACGATATACAGGGGACTGCATCTGTTGTTCTAGCTGGTGTTGTAGCAGCCCTGAAGCTCATTGGTGGTACCTTGCCTGAGCACACATTCCTCTTTCTTGGTGCTGGAGAAGCAGGAACCGGTATAGCAGAGCTAATAGCTCTTGAGATGTCAAAGCAGACTAAGACACCTATAGAAGAGAGTCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCCCGGAAGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCAGTCAACAGTCTCCTAGAGGCCGTCAAGGTTATCAAACCTACAGTTTTGATTGGATCATCGGGCGTGGGAAAAACATTTACAAAGGAAGTGGTTGAGGCTATGACTTCAAACAATGATAAACCTCTCATTTTGGCTCTCTCCAATCCTACCTCACAGTCTGAGTGTACTGCTGAAGAGGCTTATCAGTGGAGTGAGGGTCGTACAATTTTCGCTAGTGGGAGTCCATTTGATCCTGTTGAATACAAGGGCAAGGTTTATGCTTCTGGCCAGGCAAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTTTAGTAATCTCAGGAGCTATTCGAGTACATGATGATATGCTTCTAGCAGCTTCTGAAGCCTTGGCTAAACAAGTTAGCGAGGAGAACTACAAAAATGGTTTGATTTACCCACCATTCTCTAATATCAGAAAAATCTCAGCCAATATAGCAGCAAATGTTGCTGCCAAGGCCTACGAACTGGGCTTGGCCACTCGTCTTCCTCGACCACAGAATCTTGTGGAGTATGCTGAGAGTTGCATGTATACCCCTGTATACCGCAACTATAGGTGA 1953 0.448 MEGHGCSKYFGFSGCCGGDKRKISEKVVLRVNSQVSQNNNIHSTGEEEEGEEKKVIGRNMESTLKSLRDGESVLDLSPRSTVSGGVEDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSNQSLQEKKLMHNIRQYQVPLQKYVAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQNRATGQEYYELLHEFMTAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLPEHTFLFLGAGEAGTGIAELIALEMSKQTKTPIEESRKKIWLVDSKGLIVSSRKNSLQHFKKPWAHEHEPVNSLLEAVKVIKPTVLIGSSGVGKTFTKEVVEAMTSNNDKPLILALSNPTSQSECTAEEAYQWSEGRTIFASGSPFDPVEYKGKVYASGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVSEENYKNGLIYPPFSNIRKISANIAANVAAKAYELGLATRLPRPQNLVEYAESCMYTPVYRNYR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3184 650 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 88 365 IPR046346 -
Pvu2g3184 650 SMART malic_2 175 356 IPR012301 GO:0004471
Pvu2g3184 650 ProSitePatterns Malic enzymes signature. 362 378 IPR015884 GO:0004471
Pvu2g3184 650 Gene3D - 109 363 IPR037062 GO:0004471
Pvu2g3184 650 SMART Malic_M_2 366 619 IPR012302 GO:0051287
Pvu2g3184 650 PIRSF ME 76 650 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 Pfam Malic enzyme, NAD binding domain 366 618 IPR012302 GO:0051287
Pvu2g3184 650 CDD NAD_bind_1_malic_enz 366 644 - -
Pvu2g3184 650 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 366 649 IPR036291 -
Pvu2g3184 650 PRINTS Malic enzyme signature 181 205 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 241 270 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 277 299 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 337 355 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 362 378 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 393 409 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 PRINTS Malic enzyme signature 496 512 IPR001891 GO:0004470|GO:0004471
Pvu2g3184 650 Pfam Malic enzyme, N-terminal domain 175 355 IPR012301 GO:0004471
Pvu2g3184 650 PANTHER MALIC ENZYME-RELATED 40 650 - -
Pvu2g3184 650 Gene3D - 364 650 - -
Pvu2g3184 650 PANTHER MALIC ENZYME 40 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3184 Pvu-Chr2 47120072 47126513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3184 K00029 - gmx:100782096 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3184 2 47120072 47126513 Pvu10g1512 10 41665877 41671047 ECH
Pvu2g3184 2 47120072 47126513 Pvu5g1717 5 39126159 39131844 ECH
Pvu2g3184 2 47120072 47126513 Pvu9g1143 9 16740222 16745122 ECH
Pvu2g3184 2 47120072 47126513 Pvu2g3184 2 47120072 47126513 ECH
Pvu2g3184 2 47120072 47126513 Pvu4g1805 4 45247795 45253147 PCT