Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3179 ATGGAGGATGATGACCTACTCCAACGATTCCACTCGGAGTTCGCGTCCACCATATCCGGCTCCGTCATTTCCTCCACACTCAGCATCGAAGATTTCCGGAACCTCAACAGCTCCGCCGACATTTCCTCCATCAGCAGCGGCCCCGGTGAGATTCCTCCGGTCGCAATCACCGAGACGGTACTCTCGCCGCCGCCGCCGCTGCACCGCGCAGGGCTTAATGACTGCGAGACGCCGGCGGTGAGGGAGAAGTGCATCGGAAGGAGTACCAAGGGAGTGAGTTGGGGACGCACTTCGGTGATTGGGAGGAGGAAAGAGATGGAGGACGCCGTGGCAGTTATTCCGGGATTCATGTCTTGCACGTGCGATCACGTCGGCGGCTGTACCGCTCCCGGCTCCAGATCCTCCGGCGAGATCGCTCCCGTTCATTTCTTCGGCGTTTACGACGGCCATGGTGGCTCACAGGTGGCTAAGTTCTGTGCTAAGCGGATGCACGATGTTATAGCAGAGGAGTGGAACCGAGAAATGGCAGATGGAGCTGAGTGGCAGAGAAGATGGGAAACCGTATTTGCTAACAGTTTTGAGAGGACTGACAATGAAATCCTATCAGACGCAGTTGCACCTGAAATGGTAGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAAATTATTGCATCCAACTGCGGCGACTCAAGGGTAGTTCTCTGCCGCAGGACACAAACTATCCCCTTGTCAGTGGATCAAAAGCCGGATAGACAAGATGAATTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCCGAGATAACTTTCACAGCAAGAACAGACGAGGATGAGTGCTTAGTTTTGGCAAGTGATGGACTCTGGGATGTAATGAGCAATGAAGAGGTTGGAGAAGTGGCACGCCACATTCTTAGAAGACGCCGCAGATCCTTGTCAGGGGAGGAAACATCTCCTGCACAAGTTGTTGCCGACAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCCAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1179 0.5157 MEDDDLLQRFHSEFASTISGSVISSTLSIEDFRNLNSSADISSISSGPGEIPPVAITETVLSPPPPLHRAGLNDCETPAVREKCIGRSTKGVSWGRTSVIGRRKEMEDAVAVIPGFMSCTCDHVGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWNREMADGAEWQRRWETVFANSFERTDNEILSDAVAPEMVGSTASVVVLSGCQIIASNCGDSRVVLCRRTQTIPLSVDQKPDRQDEFLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLVLASDGLWDVMSNEEVGEVARHILRRRRRSLSGEETSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLIS* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3179 392 Pfam Protein phosphatase 2C 101 371 IPR001932 -
Pvu2g3179 392 CDD PP2Cc 95 378 IPR001932 -
Pvu2g3179 392 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Pvu2g3179 392 Gene3D - 84 388 IPR036457 -
Pvu2g3179 392 SUPERFAMILY PP2C-like 85 379 IPR036457 -
Pvu2g3179 392 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 76 387 - -
Pvu2g3179 392 SMART PP2C_4 83 376 IPR001932 -
Pvu2g3179 392 ProSiteProfiles PPM-type phosphatase domain profile. 93 378 IPR001932 -
Pvu2g3179 392 PANTHER ALPHABET, ISOFORM E-RELATED 76 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3179 Pvu-Chr2 47084450 47090571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3179 94 388 PP2C-type Phosphatase Gene Family AT4G26080 51.429 1.21e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3179 K14497 - gmx:100793293 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3179 2 47084450 47090571 Pvu2g3179 2 47084450 47090571 ECH