Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3169 ATGGGGAGGGCCATTAGGTGGTTGAAGGGGTTGTTTGGGGTAAAGATAGATAGAGAGCGCAAAGAAAATTCAAATCATGGCACCAAATGGTGTCACTCAGACAGAGATTCAAGAGGTTTATGTCACAATCCTACCACCATTCCTCCCAATATTTCACCTGCTGAGGCTGCTTGGCTACAGTCATTTTACTCCGAAACTGAGAAGGAGCAGAACAAGCATGCCATTGCAGTTGCAGCCGCCACTGCAGCAGCTGCTGATGCGGCAGTGGCTGCGGCTCAGGCTGCCGTAGCAGTGGTTAGATTAACCAGCCATGGCAATGGTAGAGACACCATGTTTGGTGGTGGACGAGAAAGGTTGGCTGTTGTCAAGATTCAAACCGTGTTTAGAGGATACTTGGCAAGGAAGGCATTGAGAGCCTTAAAAGGATTGGTGAAGTTACAAGCACTAGTGAGAGGGTACTTGGTGCGGAAGCAAGCAGCAGCAACCCTGCACAGCATGCAGGCTCTAATTAGAGCTCAGGCCACAGTAAGATCTAAGAAATCTCGCGGAATCATGAGCACAAAGAATGAAACACACAGGTTTCAAACACAAGCACGAAGATCCATGGAGAGATTTGATGACATAAAGAGTGAGTACATAGCTCCCATCCACAGCAGAAGGCTATCATCTTCCTTTGATGCCACAATGAATAATGCAAACAACAGTATTGATGGGAGCCCCAAAATAGTAGAAGTTGACACTGGCAGACCAAAGTCAAGGTCTCGCAGGAGCAACACATCAATGTCAGATTTTGGCGATGATCCATCATTTCAGACACTTCCTTCTCCTCTTCCATTCACTCATTTATCCATACCAAATCACAGGACTTTCCATGACTCAGAGTGGGGTTTGACAGGAGAAGAGTGCAGATTTTCTACAGCACAAAGCACTCCACGCTTCACCAACTCTTGTAGTTGTGGTTCTCTTGTTGTTGCACCTATGACACCTAGAAGTGTTTGCACAGAAAACTTCTTCTATGGACAGTACCACAATTTTCCAAACTACATGGCCAACACTCAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAGCGTCCAGATCCTGGTTCAAAGAAGAAGCTTACCCTCAATGAGATGATGGAGTCCAGGAGTAGTTTAAGTGGGGCTAGAATGCAAAGATCATGTTCACAGATTCAGGAAGCAATTAATTTTAAGAATGCTGTGATGAGTAAGCTTCAGAAATCTACAGAATTTGGTAGGGAGACAACACCAAGTTTTCCAACCAGACGAAGTGGTGATTGGTGA 1314 0.4551 MGRAIRWLKGLFGVKIDRERKENSNHGTKWCHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNGRDTMFGGGRERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSRGIMSTKNETHRFQTQARRSMERFDDIKSEYIAPIHSRRLSSSFDATMNNANNSIDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQTLPSPLPFTHLSIPNHRTFHDSEWGLTGEECRFSTAQSTPRFTNSCSCGSLVVAPMTPRSVCTENFFYGQYHNFPNYMANTQSFKAKLRSHSAPKQRPDPGSKKKLTLNEMMESRSSLSGARMQRSCSQIQEAINFKNAVMSKLQKSTEFGRETTPSFPTRRSGDW* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3169 437 Pfam Protein of unknown function (DUF4005) 310 394 IPR025064 -
Pvu2g3169 437 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Pvu2g3169 437 MobiDBLite consensus disorder prediction 417 437 - -
Pvu2g3169 437 MobiDBLite consensus disorder prediction 254 270 - -
Pvu2g3169 437 SMART iq_5 139 160 IPR000048 GO:0005515
Pvu2g3169 437 SMART iq_5 116 138 IPR000048 GO:0005515
Pvu2g3169 437 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Pvu2g3169 437 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Pvu2g3169 437 Gene3D - 114 168 - -
Pvu2g3169 437 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 419 - -
Pvu2g3169 437 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Pvu2g3169 437 MobiDBLite consensus disorder prediction 232 270 - -
Pvu2g3169 437 PANTHER IQ-DOMAIN 5-RELATED 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3169 Pvu-Chr2 47017447 47020646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3169 1 394 IQD Protein Family AT3G16490 53.383 1.18e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3169 - - var:108346918 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3169 2 47017447 47020646 Pvu2g3169 2 47017447 47020646 ECH