Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3168 ATGTCAAATTTTCATTCCGTTTTCTATGGTTTTGTAGTAGTTATTATTCTTCTACACAATCCCAGTGCAACACAGTGCCATACCAAGGGAATTAGACCCAGGCCTGGGAATGGTTTATCTACCAATATGACCACAGTCCAATTTTCAGAAGAACAGTTCATGAAATGGGTGAGATTTGTTGGCGGCCTCAAACATTCTGTCTTTAAGACAGCCAAGAATAAGCTTTTTCCTTCTCACACTTTGCACGTTTCTAAGAAGCCAAGCAAAGGAGGTTTTTCTTCAATTCAAGCAGCCATTGATTCCCTTCCATTCATCAATGTAGTGAGAGTGGTAATTAAGGTCCATGCAGGGGTTTATACGGAGAAAGTTAACATTCCTCCTTTGAAATCCTTCATAACAATACAAGGAGCTGGAGCGGATAACACCATTGTTCAATGGGGTGACACTGCTCAGAGCCAGCCATTAGGAACCTATGGTTCTGCAACTTTTGCAGTGAATTCACCTTTTTTCATAGCCAAGAATATCACATTCAAAAACACTGCTCCAATTCCAGCACCAGGAGCAGTAGGAAAGCAAGCAGTGGCATTGAGAATTTCAGCAGACAATGCAATATTCCTAGGCTGCAAATTCTTGGGAGCACAGGACACACTCTATGATCAACTGGGTAGGCATTACTATAAGGATTGTTATATCGAAGGCTCTGTTGATTTCATCTTTGGAAACGCACTCTCTCTTTTTGAGGGATGTCACGTGCATGCCATAGCACAAGTTACAGGGGCCCTAACAGCCCAAGGAAGGAGCAGCTTATTACAAGACACGGGATTCTCGTTTGTTCACTGTAAGGTCACGGGCTCAGGAGCACTTTACCTTGGAAGGGCTTGGGGGCCCTTTTCTCGCGTTGTCTTTGCTTACACTTACATGGACAACATCATCATTCCCAAAGGATGGTATAACTGGGGTGACCCTAACCGTGAAATGACTGTATTCTATGGACAGTACAAATGCACAGGAGCAGGAGCGAGCTACGCAGGGAGAGTATCATGGTCAAGGGAGCTCACTGATGAAGAAGCTAAGCCATTTATTTCCCTTAGCTACATTGATGGCTCTGAATGGATCAATCTTTCTTTTTGA 1131 0.435 MSNFHSVFYGFVVVIILLHNPSATQCHTKGIRPRPGNGLSTNMTTVQFSEEQFMKWVRFVGGLKHSVFKTAKNKLFPSHTLHVSKKPSKGGFSSIQAAIDSLPFINVVRVVIKVHAGVYTEKVNIPPLKSFITIQGAGADNTIVQWGDTAQSQPLGTYGSATFAVNSPFFIAKNITFKNTAPIPAPGAVGKQAVALRISADNAIFLGCKFLGAQDTLYDQLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQVTGALTAQGRSSLLQDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASYAGRVSWSRELTDEEAKPFISLSYIDGSEWINLSF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3168 376 ProSitePatterns Pectinesterase signature 2. 231 240 IPR033131 -
Pvu2g3168 376 SUPERFAMILY Pectin lyase-like 77 374 IPR011050 -
Pvu2g3168 376 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 375 - -
Pvu2g3168 376 PANTHER PECTINESTERASE 3 375 - -
Pvu2g3168 376 Pfam Pectinesterase 87 368 IPR000070 GO:0030599|GO:0042545
Pvu2g3168 376 Gene3D - 77 375 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3168 Pvu-Chr2 47011138 47014983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3168 92 375 Carbohydrate Esterase AT1G05310 48.973 7.19e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3168 K01051 - gmx:100802832 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3168 2 47011138 47014983 Pvu2g3168 2 47011138 47014983 ECH