Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3159 ATGAAGATCGAGGAATTGGACGACGCGGAGTGTAGTATAGTCGAACAAGAGAAGTACGAGAAGCAGGTTGTCAGCGTTGAAGTGAAAAGAGCGTTGGTGGGCGCAGGTGCTCGGATCCTGTTCTATCCCACACTCTTGTATAATGTGCTTCGTAACAAAATTGAAGCTGAGTTTAGGTGGTGGGATCAAATTGACGAGTTTTTGTTACTGGGCGCTGTTCCGTTTCCCAAAGACGTTCCTCATTTGAAGAACCTTGGTGTGGGTGGTGTGATTACTCTTAATGAGCCCTATGAAACCTTGGTGCCGTCGTCGTTGTATCGGGCTCACGGGATTGATCATTTGGTAATTCCCACTAGAGATTATCTCTTTGCCCCCTCGATTGTTGATATCAACCAGGCTGTGCAGTTCATTCACAAGAATGCAACTTGCGGCAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGGAGGAGTACAACAATTGTGCTTTGCTATCTGGTTGAATACAAGCACATGACACCTGCTGCTGCCCTGGAATATGTTCGGTCTCGACGACCTAGAGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATGACAAGTGCAGGCCTTGTCCTTTACCGTACTCCCCCTCCGGGGACACAGTTCTTATAACCAAAGCAGATCTTGAAGGCTATCATAGCACATGCGATGCCGATATGGAGCTGGCCATTGTTCCCAAACTTCCGAGGACTATGCCCATGATTGCAAGATTATCTTGCATCTTTGCATCCTTAAAAGTATCTGGTAGTAGTGTACCAATGATCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTGA 849 0.4747 MKIEELDDAECSIVEQEKYEKQVVSVEVKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSIVDINQAVQFIHKNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYDKCRPCPLPYSPSGDTVLITKADLEGYHSTCDADMELAIVPKLPRTMPMIARLSCIFASLKVSGSSVPMIRRLPVSESRAC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3159 282 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 202 IPR029021 -
Pvu2g3159 282 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Pvu2g3159 282 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Pvu2g3159 282 PANTHER OS01G0739200 PROTEIN 2 282 - -
Pvu2g3159 282 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Pvu2g3159 282 PANTHER - 2 282 - -
Pvu2g3159 282 Pfam Dual specificity phosphatase, catalytic domain 84 202 IPR000340 GO:0008138|GO:0016311
Pvu2g3159 282 CDD PTPMT1 60 201 IPR044596 GO:0004721
Pvu2g3159 282 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Pvu2g3159 282 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3159 Pvu-Chr2 46933382 46935748 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3159 4 270 Protein tyrosine phosphatase (PTP) family AT2G35680 50.641 8.53e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3159 - - gmx:100817410 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3159 2 46933382 46935748 Pvu2g3159 2 46933382 46935748 ECH