Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3148 ATGTGTGTCAGTCAGACAAAGTCAAACTTTTCAAACCTTCCAACTTCCCAATCCCAATCCATTTTATATTATATACTACTTCTCCACTCTCCATATTCAGTGTTGTTTTTCACATTCAAATCTTCTGTCACTTCAGAACCTTTTGCCTTGGCCATGGGAAGAGCTCCATGTTGTGACAAAGCTAACGTCAAAAGGGGTCCTTGGTCTCCTGAGGAAGATGAAACCCTCAAAAACTATCTCAAGAAAAATGGCACTGGTGGCAATTGGATAACTCTCCCGCAAAAAGCAGGCCTTAAGCGGTGTGGGAAGAGTTGTCGTCTGAGATGGCTGAACTATCTCAGGCCTCATATCAAGCATGGAGGTTTCACGGAGGAGGAAGACCAAGTTATCTGCACCCTTTATTCCACTATCGGAAGCAGGTGGTCCCTTATTGCGGCTCAGTTACCTGGGAGAACAGACAACGATGTGAAAAACCATTGGAACACTAAGTTAAAGAAAAAGTTTTTGGTAGCAAACACCAATGCCACTGTCAAAACTGTTTCTCCACAGTTCACAACTTCCACTACTCCTCTGTCTCAAGTTGAAGACTGTGTCTTTGATCATAAGAACTCATCTGAGTCTCATGTTTTGAGTTCGGAGCAGACACATATTCCAGTTCCTTCACCATTGCCTTTAGGGTCTCATCTCTCAGGTCTAGGCAGCACTGTACCACTATCCAATGAAGTTTCAATTTTTTCAAACTCAACATCCTTGGTGAAACAGGAAAACCAGACTCAATGGTTCAGCTATCATGACAACACTGAAGGTGAAAATGAAGCACTTTTGCTTGATTTTGTGTACGAAGATCTCTTGCTTAGTAATGGGTTTGTTTCTCAAGAAAAAAGCAGCGAAATTGCCCCATCATTTGGCTAA 912 0.4232 MCVSQTKSNFSNLPTSQSQSILYYILLLHSPYSVLFFTFKSSVTSEPFALAMGRAPCCDKANVKRGPWSPEEDETLKNYLKKNGTGGNWITLPQKAGLKRCGKSCRLRWLNYLRPHIKHGGFTEEEDQVICTLYSTIGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLVANTNATVKTVSPQFTTSTTPLSQVEDCVFDHKNSSESHVLSSEQTHIPVPSPLPLGSHLSGLGSTVPLSNEVSIFSNSTSLVKQENQTQWFSYHDNTEGENEALLLDFVYEDLLLSNGFVSQEKSSEIAPSFG* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3148 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 113 IPR017930 -
Pvu2g3148 303 PANTHER OS09G0431300 PROTEIN 52 241 - -
Pvu2g3148 303 PANTHER OS09G0431300 PROTEIN 52 241 - -
Pvu2g3148 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 168 IPR017930 -
Pvu2g3148 303 ProSiteProfiles Myb-like domain profile. 60 113 IPR001005 -
Pvu2g3148 303 SUPERFAMILY Homeodomain-like 62 160 IPR009057 -
Pvu2g3148 303 CDD SANT 122 164 IPR001005 -
Pvu2g3148 303 ProSiteProfiles Myb-like domain profile. 114 164 IPR001005 -
Pvu2g3148 303 Gene3D - 58 119 - -
Pvu2g3148 303 CDD SANT 67 113 IPR001005 -
Pvu2g3148 303 SMART sant 64 115 IPR001005 -
Pvu2g3148 303 SMART sant 118 166 IPR001005 -
Pvu2g3148 303 Pfam Myb-like DNA-binding domain 120 162 IPR001005 -
Pvu2g3148 303 Pfam Myb-like DNA-binding domain 65 113 IPR001005 -
Pvu2g3148 303 Gene3D - 120 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3148 Pvu-Chr2 46811612 46813263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3148 52 169 MYB Transcription Factor Family AT5G65790 81.356 1.78e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g3148 Myb_DNA-binding 2.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3148 K09422 - gmx:778160 289.656