Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3133 ATGAGGAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGTAAAGTGGTTGTGGTTGCGGTTAAAGCTTCTAGAGATATTTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTTATTCCGGTTCTTTCTTCAAGCAAAAGGGTATGGGGACTTTCCAGATTTACTACTGACTGTGCCTCTAGTAATTGGAGATCCAGTTTAGGCACTGCTTCAGATCAGAAAGAAGTTATTACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAAATCAGAGTGAAGATTCTTTCAGGTTCCTTATGTGGAGCTGTGGCTGCTGAGGCCAAGAGAGTGCAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAACATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAACGGTCTAGGCCAAAGATTCTGCGTTTGAACTTGAACAGTTCACCTAAGATGGAACTAAACATGGGTTGTCCATCTACACTTGCAAGAAACTTGAAAGATGGCAACAATGAACATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCACTGACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTCCACTCAGAGAGACAAAGAAGAGGTTTTACCTTCATTCACGAGGGACTGACCAACCTAGAGGATATTGAGTCTGACTCCGAGAGTGAAAAGCTAAGTATGTCGTCCAAGAGCTCATATTTTCAGCCATGGATTGCAAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACAACATGCAAAGATCCAGTGACAAGACTCTGGCCACTGCTTATGAAACTTTACTTGAGAAATTCTCAAAGTTGGATGAAGATCCTATACTAGGAATGCTTAATTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATCGCACTAGCTAAAAGTTCACCTCCTGGCCCTCCCCCATTGTGCTCTATCTGTCAGCACAAGGCACCTGTGTTTGGCAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACAGGTGGTTTTTCACAGGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGTGGAGTTCTACTTGATGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAGCATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAAAATGGAAGAAGATTGCTAGTTTACGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTACTGGAATGGTCAGCAAGACAAAAGATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTAGGTTGTATTGTGCACCGTGACATGCGACCAAACAATATCCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGACATGGGTGTGGAAACGAGAGTGATAGGAACATTTGGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTCTACTCGTTTGGGATAGTACTGCTGGAGCTCATCACAGGAAGAAAAGCAGTGGACATAAACCGCCCCAAAGGACAGCAATGTCTCAGTGAATGGGCAAGGCCATTGCTTGAAAAAAAAGCGATTTATAAACTAGTAGATCCGAGTTTAAGAAAGTGCTATGTTGATGAAGAGGTGTATCGCATGCTGCAATGTTCCTCTTTGTGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCACAGGTGCTGAAGATGCTGGAAGGTGACATTCTAATGTGA 2031 0.4323 MRSQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPVLSSSKRVWGLSRFTTDCASSNWRSSLGTASDQKEVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVMMKRSRPKILRLNLNSSPKMELNMGCPSTLARNLKDGNNEHADIIRGPAVTPASSPEQGSPPLTATDIGTSSISSSDPATSPFFHSERQRRGFTFIHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNNMQRSSDKTLATAYETLLEKFSKLDEDPILGMLNCKIDVNLSKSVREAIALAKSSPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLLDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVENGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELITGRKAVDINRPKGQQCLSEWARPLLEKKAIYKLVDPSLRKCYVDEEVYRMLQCSSLCIGRDPHLRPRMSQVLKMLEGDILM* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3133 676 MobiDBLite consensus disorder prediction 211 248 - -
Pvu2g3133 676 MobiDBLite consensus disorder prediction 217 247 - -
Pvu2g3133 676 Pfam Protein tyrosine and serine/threonine kinase 404 670 IPR001245 GO:0004672|GO:0006468
Pvu2g3133 676 CDD STKc_IRAK 406 672 - -
Pvu2g3133 676 ProSiteProfiles Protein kinase domain profile. 400 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3133 676 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 676 - -
Pvu2g3133 676 PANTHER OS01G0253100 PROTEIN 17 676 IPR045271 GO:0004714|GO:0006468
Pvu2g3133 676 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Pvu2g3133 676 SUPERFAMILY Protein kinase-like (PK-like) 380 671 IPR011009 -
Pvu2g3133 676 ProSitePatterns Tyrosine protein kinases specific active-site signature. 521 533 IPR008266 GO:0004672|GO:0006468
Pvu2g3133 676 Gene3D Transferase(Phosphotransferase) domain 1 476 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3133 Pvu-Chr2 46699989 46704628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3133 380 674 Trihelix Transcription Factor Family AT1G70460 51.495 6.63e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu2g3133 PK_Tyr_Ser-Thr 8.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3133 - - gmx:100305413 1253.81