Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3132 ATGGGGAGAAAGTGCTCACATTGTGGAGTGATAGGGCACAATTCAAGGACCTGCACTTCTTTGAGAGGCTCTTCTTTCGTTGGACTTCGCCTCTTTGGCGTGCAATTAGACACCTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCCTCTTTTTCTTCATCAAGATTAACCATTGATGAAAACTCTGACCGAACCTCTTTTGGGTATCTATCAGACGGTCTCATACCTCCACTTCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTAGGACTGGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCTAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCTCAGAAGTACTTTCTCAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCAAGTCTCTTTGACGTGGTTGGTAGCAACAGCCCCAGCATAGGAGTTTCGTCTAAATGTGAAGTTAAGAATAATGATGCCACTTTGTCCTTGCTAACCTACTTTCAACAAGAAACCAAATCAGATTATAATAAGCAAGAAAATCTTGATAATTGCCCTCATCAACCTCCTAATCTGGACCTTACTCTTCGTTCCTGCTTATTAGTGTGA 663 0.4314 MGRKCSHCGVIGHNSRTCTSLRGSSFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRLTIDENSDRTSFGYLSDGLIPPLQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDVVGSNSPSIGVSSKCEVKNNDATLSLLTYFQQETKSDYNKQENLDNCPHQPPNLDLTLRSCLLV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3132 220 Pfam Myb-like DNA-binding domain 94 139 IPR001005 -
Pvu2g3132 220 ProSiteProfiles SANT domain profile. 95 143 IPR017884 -
Pvu2g3132 220 CDD SANT 94 139 IPR001005 -
Pvu2g3132 220 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Pvu2g3132 220 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 198 - -
Pvu2g3132 220 ProSiteProfiles Myb-like domain profile. 87 139 IPR001005 -
Pvu2g3132 220 Gene3D - 93 145 - -
Pvu2g3132 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 143 IPR017930 -
Pvu2g3132 220 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 141 IPR006447 GO:0003677
Pvu2g3132 220 PANTHER TRANSCRIPTION FACTOR KUA1 1 198 - -
Pvu2g3132 220 SMART sant 91 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3132 Pvu-Chr2 46688736 46690196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu2g3132 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3132 - - gmx:778093 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3132 2 46688736 46690196 Pvu2g3132 2 46688736 46690196 ECH