Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3114 ATGGCACTAAGTGGCAGGCATTACTGGATCATCTTCATCCTTTTTCAAGCACCCCTTCTTCTCTATTCTGCCGCTTCGGACTTTGAATTGCTCCTCAAACTCAAAGATAACTTGGAAAACTACGGTTCCTCCTTGGACTCATGGAACTCTACCACTCCTCCTTGCAACGTTGGCCATGCCAACTGGCATGGCATTCTTTGCTACGAAGGAAAAGTGTGGGGCGTGAAGCTTGAGAACATGGGGCTCAAAGGGGTCATTGACATAGAATCTCTAAAAGAATTGCCTTACCTAAGAACCTTGAGTTTCATGAACAATAATTTGGAGGGTTCATGGCCCGAAATTCACCTCTTGGTTGGTCTCAAGTCTATTTACCTTTCGAATAACAAGTTTTCTGGGGAGATTCCTTATAGGGCCTTCGAGGGGTTGAAGTGGTTGAAGAAAATTCATCTGTCGAACAACCAATTCTCGGGTTTTATTCCAACTTCGGTGACACAGTTACCGAGACTCATAGAGCTGAGGTTGGATGGGAATCAATTCACTGGCCCCATTCCCCATTTTCATCACCTGAACAGATTGAGATCGTTTAATGTTGCTAATAATGAGTTGCAGGGTCAGATTCCTCACACCATTAGTAGAATGCCGGTTTCTTCCTTCTCTGGTAATGAAAGGTTATGTGGAGACCCATTGGAGTCCTGCACCGCGAAGCCCTCCACTGCGAGCATCATTGTGGCAGTGGTGGTTGTTGGCCTGGCAGTGCTTGTGATTGGAGCAGTAGGGTTCATCATTCACAGAAGAAAGCAACGAGAGTCTGCAGCGAGCTTGGGCAATCCATCCAGTGGCCTTGGCAAAGGGCGTATGAGGGGTGGGGGTGATGAGAACCACTTGTCCTCAAGGTCAATGAGCTCCTCACACAGCAGAAGAGGGGATACCATGAGACTCTCTTTTCTGAGAGATGACAGAGAAAGGTTTGACCTTCAAGAGTTGCTGAAAGCCTCTGCTGAGATTTTGGGAAGTGGCTGCTTCAGCTCTTCATACAAGGCTGCTTTGATAAATGGGCCAACAATAGTGGTGAAGAGGTTCAAGCAGATGAACAATGTGGGGAAGGAAGAGTTCCAAGAGCACATGAGAAAGCTAGGGAGTTTGAATCATCCTAACTTGCTTCCTCCAGTGGCTTACTATTACAGAAAGGAAGAGAAGCTCGTGGTCACAGACTATGTTCACAATGGCAGTCTCGCTGTTCGCCTTCATGGGCACCAATCCCTGGGAGAACCAAGCCTTGAGTGGCCAGTCCGGTTGGAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAGGGACATGCCAAGCCTAATTGCCCCACATGGAAATCTCAAGTCCTCTAATGTTCTCTTGACTGAATCTTTTGAGCCTCTCCTCACAGACTATGGCCTAGTCCCAGTGATAAACCAGGAATTGGCTCAGGACATCATGGTGATATACAAGAGTCCTGAGTATTTGCAACATGGAAGGATTACAAAGAAGAGTGATGTGTGGTGTCTTGGAATACTGATTCTGGAGATCCTAACAGGGAAGTTCCCTGCAAACTTTTTGCAAAAGGGTAAAGGAAGTGAGGTGAGTTTGGCCAGTTGGGTGGATTCAGTTGTGCCAGAAGAGTGGACCAATGCTGTGTTTGATCAAGATATGGGGGAAACAAAGAACAGTGAAGGAGAGATGGGGAAGCTTTTGAAGATTGCCTTGAATTGTTGTGAGGCTGATGTGGATAAGAGGTGGGATATAAAGGAATCAGTAGCTAAAATCCTTGAGGTGAAGCAAAGGGATGATGATCAAGACAATTTTTTCAAAACATACATTTGA 1860 0.4591 MALSGRHYWIIFILFQAPLLLYSAASDFELLLKLKDNLENYGSSLDSWNSTTPPCNVGHANWHGILCYEGKVWGVKLENMGLKGVIDIESLKELPYLRTLSFMNNNLEGSWPEIHLLVGLKSIYLSNNKFSGEIPYRAFEGLKWLKKIHLSNNQFSGFIPTSVTQLPRLIELRLDGNQFTGPIPHFHHLNRLRSFNVANNELQGQIPHTISRMPVSSFSGNERLCGDPLESCTAKPSTASIIVAVVVVGLAVLVIGAVGFIIHRRKQRESAASLGNPSSGLGKGRMRGGGDENHLSSRSMSSSHSRRGDTMRLSFLRDDRERFDLQELLKASAEILGSGCFSSSYKAALINGPTIVVKRFKQMNNVGKEEFQEHMRKLGSLNHPNLLPPVAYYYRKEEKLVVTDYVHNGSLAVRLHGHQSLGEPSLEWPVRLEIVKGIAKGLEYLYRDMPSLIAPHGNLKSSNVLLTESFEPLLTDYGLVPVINQELAQDIMVIYKSPEYLQHGRITKKSDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVDSVVPEEWTNAVFDQDMGETKNSEGEMGKLLKIALNCCEADVDKRWDIKESVAKILEVKQRDDDQDNFFKTYI* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3114 619 PANTHER LRR RECEPTOR-LIKE KINASE 9 614 - -
Pvu2g3114 619 Pfam Protein tyrosine and serine/threonine kinase 334 598 IPR001245 GO:0004672|GO:0006468
Pvu2g3114 619 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Pvu2g3114 619 Gene3D Transferase(Phosphotransferase) domain 1 406 616 - -
Pvu2g3114 619 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Pvu2g3114 619 SUPERFAMILY L domain-like 52 214 - -
Pvu2g3114 619 ProSiteProfiles Protein kinase domain profile. 330 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3114 619 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Pvu2g3114 619 Gene3D Ribonuclease Inhibitor 187 232 IPR032675 -
Pvu2g3114 619 SUPERFAMILY Protein kinase-like (PK-like) 334 600 IPR011009 -
Pvu2g3114 619 MobiDBLite consensus disorder prediction 271 311 - -
Pvu2g3114 619 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 614 - -
Pvu2g3114 619 MobiDBLite consensus disorder prediction 294 309 - -
Pvu2g3114 619 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3114 Pvu-Chr2 46504049 46506879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3114 11 619 Receptor kinase-like Gene Family AT5G35390 53.208 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu2g3114 PK_Tyr_Ser-Thr 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3114 - - gmx:100804368 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3114 2 46504049 46506879 Pvu4g1879 4 45763426 45767079 PCT