Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3102 ATGGCCGTCACGCCCTCCACCTCGCTCCTCTCCTTCCTCCAACGCCTCCAACAAACCGCCTTCGAGGCCTTCGGCGCTTCCGATTTCGATCCCAAGACCTACGTCGACATGCCTCTCAAGTTCGAACTGTCCGTCACCGAGGACGCGTTCCAGAAGCTTCCGCGCAACGCCCACGGGATCGTCGCGGTTGAAGATTTAAAGCGTTTTCTAGAAGCCTACTTGGGAGGTGCAGGGGACGATCTGGTGTACCTGCAACCACACGATTTCGTTCGCGAACCGGAGGGTTTCTTGCCCAAAGTCAAAAACCCTCAGGTGCGGGCCTGGGCCTTGCAGGTCCATTCGCTTTGGAAAAACTTGAGCCGGAAAGTATCCGCTGCGGTGCAGGCGCACCCGGACTTGCATACGCTGCTCCCTCTCCCCGGTTCAGTTGTCATTCCCGGTTCGCGTTTTCGCGAGGTTTATTACTGGGATTCCTATTGGGTAATTAGGGGCCTGATCGCCAGTAAAATGTACGATACTGCCACTGCTATTGTAACCAACCTCATTTCCTTGGTAGAGCAATATGGATTTGTTCTTAATGGTGCTAGAGCGTACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGGTTTATGAGATATACTGTACCACCGGTGACGTGGAATTAGTTAAAAGATCTCTACCTGCACTACTCAAAGAGTATGAATTTTGGAATTCAGAGATACATAAGGTGACCATTTTGGATGCTCAAGGTTGCCCTCACACTTTAAATCGCTATAATGCAATGTGGGACAAACCCAGGCCAGAATCATCCACAAAGGACAAGGCATTTGCTTCCAATTTCTCGAGTGTTTCAGAAAAACAGCAGTTTTACCGTGAGTTGGCATCAACTGCTGAATCGGGATGGGATTTCAGCACTAGATGGATGAGAAACCCGCCTAATTTCACAACAGTGGCTACAACTTCTGTAATACCTGTTGATTTAAATGCATTTCTACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTGCTGGAGATAATAGCACTGCTGAAAGGTTCCTGGAAAATTCTGATCTTAGAAAGAAGGCAATGAACTCGGTTTTCTGGAATGCAAACATGAAACAATGGCTTGACTTCTGGCTCGAAAATACATGTGAGGAGGTTCATGTTTGGAAAAACGGGCACCAGAATCAAAATGTGTTTGCTTCCAATTTTATTCCTTTGTGGATGAATCCATTTTATTCAGACACTTCACTTGTGGGTAGTGTTGTTGAAAGTCTCAAAACTTCCGGCCTTGTCCGTGCTGCTGGAGTTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGGTGGGCGCCGCTTCAACACATGCTAGTGGAAGGCCTTCTAAAATCTGGGTTGCAAGAAGCAAGGTCATTGGCTGAAGAAATTGCCATCGGATGGGTCACAACCAATTATATTGTTTACAAGAAAACGGGTTCAATGCATGAAAAGTTTAACGTGGAGCATTGTGGAGAATTTGGAGGTGGAGGTGAATATGTGCCCCAGACTGGTTTTGGCTGGTCAAATGGTGTTGTGTTGGCATTCTTAGAGGAGTTTGGATGGCCTGAAGATCGGAACATTGAATGCTGA 1656 0.4704 MAVTPSTSLLSFLQRLQQTAFEAFGASDFDPKTYVDMPLKFELSVTEDAFQKLPRNAHGIVAVEDLKRFLEAYLGGAGDDLVYLQPHDFVREPEGFLPKVKNPQVRAWALQVHSLWKNLSRKVSAAVQAHPDLHTLLPLPGSVVIPGSRFREVYYWDSYWVIRGLIASKMYDTATAIVTNLISLVEQYGFVLNGARAYYTNRSQPPLLSAMVYEIYCTTGDVELVKRSLPALLKEYEFWNSEIHKVTILDAQGCPHTLNRYNAMWDKPRPESSTKDKAFASNFSSVSEKQQFYRELASTAESGWDFSTRWMRNPPNFTTVATTSVIPVDLNAFLLGMELNIAFFAKVAGDNSTAERFLENSDLRKKAMNSVFWNANMKQWLDFWLENTCEEVHVWKNGHQNQNVFASNFIPLWMNPFYSDTSLVGSVVESLKTSGLVRAAGVATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLQEARSLAEEIAIGWVTTNYIVYKKTGSMHEKFNVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3102 551 PANTHER TREHALASE 9 551 - -
Pvu2g3102 551 Pfam Trehalase 29 542 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 ProSitePatterns Trehalase signature 2. 452 461 IPR018232 GO:0004555|GO:0005991
Pvu2g3102 551 Gene3D - 17 549 IPR012341 GO:0005975
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 188 206 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 258 275 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 293 310 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 325 342 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 368 384 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 445 461 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PRINTS Glycosyl hydrolase family 37 signature 525 538 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 PANTHER TREHALASE 9 551 IPR001661 GO:0004555|GO:0005991
Pvu2g3102 551 SUPERFAMILY Six-hairpin glycosidases 24 544 IPR008928 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3102 3 551 Trehalose Biosynthesis Gene Families AT4G24040 59.675 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3102 K01194 - gmx:547539 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3102 2 46368696 46374844 Pvu2g3102 2 46368696 46374844 ECH