Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3058 ATGGAGAGTGAATGGAGCTGGGAGCAGAACACACTCATCAATGAGTTAATTCAGGGGATGGAGCTAGCAAGGAAGTTGAAGGAAGACTTGAGGATGCCGTATTCAGTTGACTCGAGAGATATGCTGGTGCAGAGGATAGTATCTTCTTATGAAAAGGCTCTACTCATTCTAAGGTGCAATGCACCAATTTCTGAGTTGCAGGCCACGAGTCAAGCGACTGCAACTTTGTTACCAGAGTCCCCAATATCTGTCCATGGAAGTCCTCTGAGTGAGGATGTTGATGGGGCCATCAAGGATCACAAAGAAATTCAACATGATGCAAAGAAAAGAAAGATAACGCCCAAATGGATGGATCATGTAAGAGTGAGCTGTGATAGTGGCCTTGAAGGGCCACAAGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGACATCCTCGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGGCTGTTGGGCCACGAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATATTCGACATAACCTACAGAGGAAAGCATACCTGTTCTCAAGGAAACAACACTGTTTTGCCACCTAAGTCACCAGACAAACAAGAGAAGACACACATTCATAACATTGACATTCACCATGCACAGGCATCACAAGAAAGCCTTCCGAAGTTCAGAAACATCATGTCTGTCAACACAGAAAAACTAGACAATGGAGATACGGCATATCCTTTCACTTTCCCTTCGACTTCATCTGGATGCATGAAACAATACAACCACAGCTTTATTCCTTTGACCCTTGAGAATGAGTACTTCTTGAGCGATCAATACCAAACGTACCTGTTATCTCCAACAACACCAGAATCGAACTATTTACCATCTCCAACTTTCCAGATTAATGAGTTTGATGGAATCTACAACAAGCGTTATTCAGAATCAGATATTAACGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCCGATTTCAATTTCTCACTTGATCCAGCGGAAATTGACCCGAATTTCCCTTTCAACACCCCAGGATTTTTCTCCTGA 1086 0.4319 MESEWSWEQNTLINELIQGMELARKLKEDLRMPYSVDSRDMLVQRIVSSYEKALLILRCNAPISELQATSQATATLLPESPISVHGSPLSEDVDGAIKDHKEIQHDAKKRKITPKWMDHVRVSCDSGLEGPQEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNTVLPPKSPDKQEKTHIHNIDIHHAQASQESLPKFRNIMSVNTEKLDNGDTAYPFTFPSTSSGCMKQYNHSFIPLTLENEYFLSDQYQTYLLSPTTPESNYLPSPTFQINEFDGIYNKRYSESDINEIISTNTSATNSPIPDFNFSLDPAEIDPNFPFNTPGFFS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3058 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g3058 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g3058 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 357 IPR044810 GO:0003700
Pvu2g3058 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g3058 361 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g3058 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g3058 361 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3058 Pvu-Chr2 46023368 46025419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3058 6 256 WRKY Transcription Factor Family AT4G23810 43.321 3.07e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g3058 WRKY 8.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3058 - - gmx:100815760 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1682 2 30515098 30516646 Pvu2g3058 2 46023368 46025419 PCT