Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3031 ATGGGTAACTGCAGCAGCAGCCACGGCGGCGGTGGCACGCCCGCTACTTCCACTTACTCCGACGAACTTCCCCAGCGCAACGGCATCACCGTCCTACCTCCGAACACGAACCCTTCACCCCCACTCCCGAAGCCCCAAGCGTCGTCCTCGCTGGGCCGCGTGCTGGGCCGGCCCATGGAGGACGTCCGGTCCATTTACATCTTCGGGCGCGAGCTGGGCCGCGGGCAGTTCGGCGTGACGTACCTGGTGACCCACAAGGTCACGAAGGAGCAGTTCGCGTGCAAGTCGATCGCAACGCGCAAGCTCGTGAACCGCGACGATATCGATGACGTCCGGCGCGAGGTCCAGATCATGCATCACCTCACCGGCCACCGCAACATCGTGGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAATCTCATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCACCAAAGGCCACTACTCGGAGCGCGCTGCCGCTAATTCCTGCCGCCAGATCGTGACGGTGGTGCACAATTGCCACTCCATGGGCGTGATGCACAGGGACTTGAAGCCCGAGAATTTCTTGCTGCTCAACAAGGACGATGATTCCCCTCTCAAGGCCACGGATTTTGGCCTCTCCGTCTTCTTCAAGCCAGGAGATGTGTTTAGAGACCTTGTTGGGAGCGCTTACTATGTTGCTCCTGAGGTGTTGAGAAAAAGTTATGGGCCTGAGGCTGATATTTGGAGTGCTGGGGTTATACTCTACATTCTGCTTTCTGGTGTTCCACCTTTCTGGGCAGAAAATGAACAGGGTATATTTGATGCAATTCTGCGTGGACATATTGATTTCGCATCGGATCCCTGGCCTTCCATATCAACTAGTGCCAAAGATCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTTCAGCAGTTGAAGTACTCAATCATCCCTGGATGAGAGTGGATGGAGATGCATCAGATAAGCCTCTTGATATTGCTGTTTTGTCCAGAATGAAACAATTCCGAGCAATGAACAAGCTAAAAAAAGTAGCCCTGAAGGTTATTGCTGAAAGTCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACATTTGAGGAGTTGAAAGCTGGTCTCCCAAAACTGGGTAGTAAACTTTCTGAGTCTGAAGTAAGGCAATTGATGGATGCGGCTGATGTAGACGGAAATGGAACCATTGATTACATTGAATTTATAACTGCTACGATGCACATGAATAGAATGGAAAGAGAGGATCATCTATATAAAGCCTTTGAATATTTTGACAATGATAGGAGCGGTTACATCACAATGGAAGAGTTGGAATCTGCCCTCAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGATACTGACAATGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATATCCCACATAACCCAGAGACGTCGCAAATAA 1560 0.5013 MGNCSSSHGGGGTPATSTYSDELPQRNGITVLPPNTNPSPPLPKPQASSSLGRVLGRPMEDVRSIYIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLVNRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLNKDDDSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRKSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISTSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAESLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMDAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDNDRSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDISHITQRRRK* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3031 519 SUPERFAMILY Protein kinase-like (PK-like) 66 325 IPR011009 -
Pvu2g3031 519 Pfam EF-hand domain pair 442 504 IPR002048 GO:0005509
Pvu2g3031 519 Pfam EF-hand domain pair 372 432 IPR002048 GO:0005509
Pvu2g3031 519 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 510 - -
Pvu2g3031 519 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Pvu2g3031 519 SUPERFAMILY EF-hand 364 505 IPR011992 -
Pvu2g3031 519 SMART efh_1 371 399 IPR002048 GO:0005509
Pvu2g3031 519 SMART efh_1 478 506 IPR002048 GO:0005509
Pvu2g3031 519 SMART efh_1 407 435 IPR002048 GO:0005509
Pvu2g3031 519 SMART efh_1 443 471 IPR002048 GO:0005509
Pvu2g3031 519 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 39 510 - -
Pvu2g3031 519 SMART serkin_6 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3031 519 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Pvu2g3031 519 Gene3D - 332 508 - -
Pvu2g3031 519 Gene3D Transferase(Phosphotransferase) domain 1 152 331 - -
Pvu2g3031 519 CDD STKc_CAMK 66 323 - -
Pvu2g3031 519 ProSiteProfiles EF-hand calcium-binding domain profile. 403 438 IPR002048 GO:0005509
Pvu2g3031 519 MobiDBLite consensus disorder prediction 1 33 - -
Pvu2g3031 519 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Pvu2g3031 519 Pfam Protein kinase domain 68 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3031 519 Gene3D Phosphorylase Kinase; domain 1 68 151 - -
Pvu2g3031 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Pvu2g3031 519 ProSiteProfiles EF-hand calcium-binding domain profile. 439 473 IPR002048 GO:0005509
Pvu2g3031 519 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Pvu2g3031 519 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3031 519 ProSitePatterns EF-hand calcium-binding domain. 416 428 IPR018247 -
Pvu2g3031 519 MobiDBLite consensus disorder prediction 1 54 - -
Pvu2g3031 519 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3031 Pvu-Chr2 45785936 45794727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3031 52 518 EF-hand Containing Proteins AT4G23650 80.514 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu2g3031 Pkinase 7.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3031 K13412 - gmx:100777096 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1660 2 30307579 30313970 Pvu2g3031 2 45785936 45794727 PCT