Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3028 ATGGAGCAGAAAAGCATTCTGATGTCAGCTTTGGGTGTTGGGGTGGGAGTGGGAGTGGGGATTGGATTGGCTTCTGGACCAAACGTTGGCAAATGGGGAGCCAACAGTTTTTCCTCAAACGCTATCACTGCTGAGAAGATGGAGCAGGAAATGCTCAGACAAGTTGTTGATGGAAGAGAAAGCAACGTCACTTTTGAGAAGTTCCCTTATTACCTCAGCGAGCAGACAAGGGTTTTGCTGACAAGTGTGGCTTATGTCCATTTAAAGCATGCTGAGGTTTCTAAATATACACGGAATCTTGCTCCTGCAAGCAGAACTATTCTGCTCTCAGGGCCTGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTAGCTCATTATTTTGACGCCAAGTTACTGCTGTTAGATTTAACCGACTTTTCATTGAAGATTCAGAGTAAATATGGTTCTTCCAACAAAGAATCTTCTTTCAAAAGATCCACTTCAGAGACTACTTTGGAGCGGCTTTCTGATCTAATTGGGTCATTTTCAATCTTTTCACAAAGGGAAGAACCTAAAGGCAAAATGTACAGGCCTAGCAGTGGAATGGACCTCCAGTCAATGGGAGCCGAAGCATCTTGTAATCCTCCACCACTTCGTAGGAATGCTTCTTCCTCTTCAAATATAAGTGGCCTTGCTTCCCAAACCAATGCTACGAATTCAGCTCCTCTGAAGCGCACAACCAGCTGGTCTTTTGACGAAAAGCTTCTTATACAGTCTCTTTACAAGGTTCTGGTTTTCGTGTCAAAAACCTATCCCATTGTGCTATATTTGCGGGATGTTGATAAGCTGTTATACAAATGGCAAAGGATATATTACTTGTTCCAGAAAATGTTGAAGAAACTATCTGGACCCATTTTGATTCTTGGTTCACGAGTAATAGATTGTGGTAATGACTATGAAGAGGTGAATGAGAAGCTTGATTCACTCTTCCCATACACCGTAGAAGTCAGGCCCCCAGAAGATGAGTCACGTCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAGAAATCATATCATGGAAGTCCTTGCAGCAAATGATCTCGATAGTGATGACCTAGATTCCATATGTGTAGAAGACACAATGGTTCTCAGCAACTATATAGAAGAGATTATTGTGTCAGCAATTTCGTGTCATTTGATGAAAAACAAAGACCCTGAATACAGAAATGGGAAGCTCCTTATTTCTTCCAATAGCTTGTCCCATGCATTGAGTATATTCCACAAGGGGAAATCCAGTAAAGGAGATACCTTAAAATTAGAAGATCAAGCTGTAAAATCTGAGAAGCAAAGAGAGGAAGGAACTGATATGAAATCAGGAACAAAGTCTGAAAATGCTGCTCCTGTAAAAAAGGCTGAAGCAGAAATATCAACTTCGGTGGCAAAGGCGGCGAGTGAAAAATCAGTTCCTGCTCCCAAAGCCCCCGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGGATAAGGCCTGAGGTAATACCAGCAAATGAGATTGATGTCACATTCTCTGACATTGGAGCCTTGGATGAGACCAAAGAATCACTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGACCTTTTCACAGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGGCCTCCTGGCACTGGGAAGACCATGTTAGCTAAGGCCATTGCAAAGGAGGCTGGAGCAAGTTTCATCAATGTTTCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACACTTGCAGCCAAGGTCTCCCCAACTATTATATTCGTGGATGAGGTTGATAGCATGCTTGGGCAACGTACCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATAAAGAATGAGTTTATGACCCATTGGGATGGACTTTTGACAAAACAAGGGGAGAGAATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGATCTCGATGAAGCTATTATTAGGCGATTTGAAAGAAGAATTATGGTACCACTACCGTCTGTGGAAAACAGGGAAAAGATTTTGAAGACTCTTTTAGCAAAAGAGAAGGTGGACAACGAACTTGATTTTAAGGAACTTGCAAATATGACCGAAGGATATACTGGAAGTGATCTTAAGAACTTGTGCACAACTGCTGCCTATCGTCCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTGAAGAGTTTGGATAAAAAGCAGAAAGCTGCCAAGAAACAGAATGACTATGTAAAAGATAGTCAAGGTGAACCATCTATTGCAGGAACTAATCAAGATGGTACAAGTGGAGAAGAGGAAATCGAACAAGAAAGAGTTATTACCCTTAGGCCATTGAATAAGCAAGATTTCAAAGAGGCCAAGAATCAGGTTGCTGCAAGCTTTGCAGCTGAAGGGGCTGGAATGAGTGAGCTGAAACAGTGGAATGATTTGTACGGAGAAGGGGGTTCAAGGAAGCAGCAGCAATTGTCCTACTTCCTATGA 2562 0.4243 MEQKSILMSALGVGVGVGVGIGLASGPNVGKWGANSFSSNAITAEKMEQEMLRQVVDGRESNVTFEKFPYYLSEQTRVLLTSVAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFDAKLLLLDLTDFSLKIQSKYGSSNKESSFKRSTSETTLERLSDLIGSFSIFSQREEPKGKMYRPSSGMDLQSMGAEASCNPPPLRRNASSSSNISGLASQTNATNSAPLKRTTSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDKLLYKWQRIYYLFQKMLKKLSGPILILGSRVIDCGNDYEEVNEKLDSLFPYTVEVRPPEDESRLVSWKSQLEEDMKMIQVQDNRNHIMEVLAANDLDSDDLDSICVEDTMVLSNYIEEIIVSAISCHLMKNKDPEYRNGKLLISSNSLSHALSIFHKGKSSKGDTLKLEDQAVKSEKQREEGTDMKSGTKSENAAPVKKAEAEISTSVAKAASEKSVPAPKAPEVPPDNEFEKRIRPEVIPANEIDVTFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKQGERILVLAATNRPFDLDEAIIRRFERRIMVPLPSVENREKILKTLLAKEKVDNELDFKELANMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLDKKQKAAKKQNDYVKDSQGEPSIAGTNQDGTSGEEEIEQERVITLRPLNKQDFKEAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKQQQLSYFL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3028 853 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Pvu2g3028 853 MobiDBLite consensus disorder prediction 211 228 - -
Pvu2g3028 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 756 IPR027417 -
Pvu2g3028 853 MobiDBLite consensus disorder prediction 447 462 - -
Pvu2g3028 853 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Pvu2g3028 853 Pfam AAA+ lid domain 716 753 IPR041569 -
Pvu2g3028 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 853 - -
Pvu2g3028 853 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 853 - -
Pvu2g3028 853 MobiDBLite consensus disorder prediction 447 504 - -
Pvu2g3028 853 Gene3D - 694 766 - -
Pvu2g3028 853 MobiDBLite consensus disorder prediction 759 795 - -
Pvu2g3028 853 CDD AAA 560 693 - -
Pvu2g3028 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 357 IPR027417 -
Pvu2g3028 853 MobiDBLite consensus disorder prediction 773 789 - -
Pvu2g3028 853 SMART AAA_5 558 695 IPR003593 -
Pvu2g3028 853 Gene3D - 521 693 IPR027417 -
Pvu2g3028 853 MobiDBLite consensus disorder prediction 200 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3028 Pvu-Chr2 45759059 45764727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3028 522 754 Calmodulin-binding Proteins AT3G56690 38.559 1.62e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3028 - - gmx:100815589 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1657 2 30299171 30303258 Pvu2g3028 2 45759059 45764727 PCT