Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3018 ATGGATGAATTTGCGTGCTTGAGGGATTGGGATTTGGAGGCTATTGTGAGAGGAAGCAGTGGTGAAGCCACCGCCATGGACGATCCAAATCCTCATTTTTCTTATTTCTTCTCTCACCAAGATGAGCTACTTGACAGCTTTCCAGAATTCTCAGAAACCACCAGGGTCCTTGATGATCTCGAAGATCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTTTCACCTCACACCATCGTCACAACTTCTCTCTCTATCCCCATAGAACCCCAACAAGTCAAAGAACTCAAAGCATCAGAAGAGAAGCTAGCTCTACAAGGCTTGAAAGTCCCCCCAACACCAAAGTGTAAAAAAGGGAAGAAGAACCAGAACAAGAGTGTGGTGAAGCAGGTAACAACAGCAGAAGGTCTTGACGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCTCCCTATCCAAGAAGCTACTATAGGTGCAGCAGTTCGAAAGGGTGTTTGGCGAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCAGTTTTTCTGGTTACCTACACTGCTGAACACAGCCATCCCCACCCAACTCGAAGAAACTCTCTTGCTGGGACCACTAGAAAGAACAATTCCCTCATTCCCCCTCCAACCACTTCTTGTTCCTCAAGGACACCTTTGGTGGTGCAATCCATTCAAGATAAACTTGTAACAAGTGACTTGAAGAAAGAGGAAGATTTTCTTGAGTGGTTGGATGATAGTGCTCAATTTGGTGATGGTTGGATTCCAAGCTCAGATCTAGAGAAGCTTATTGGATTTGAGTGCCAACATTTTGCACTAGATGGAGGTTTCACTGATGCTTATGCACACTCTTGA 879 0.4505 MDEFACLRDWDLEAIVRGSSGEATAMDDPNPHFSYFFSHQDELLDSFPEFSETTRVLDDLEDLYKPFYPVLHPLSPHTIVTTSLSIPIEPQQVKELKASEEKLALQGLKVPPTPKCKKGKKNQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLIPPPTTSCSSRTPLVVQSIQDKLVTSDLKKEEDFLEWLDDSAQFGDGWIPSSDLEKLIGFECQHFALDGGFTDAYAHS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3018 292 MobiDBLite consensus disorder prediction 200 223 - -
Pvu2g3018 292 Pfam WRKY DNA -binding domain 138 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g3018 292 MobiDBLite consensus disorder prediction 194 223 - -
Pvu2g3018 292 Gene3D WRKY domain 121 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g3018 292 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 254 IPR044810 GO:0003700
Pvu2g3018 292 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 254 - -
Pvu2g3018 292 SUPERFAMILY WRKY DNA-binding domain 131 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g3018 292 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g3018 292 ProSiteProfiles WRKY domain profile. 132 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3018 Pvu-Chr2 45663178 45664544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3018 1 240 WRKY Transcription Factor Family AT4G23550 48.583 6.85e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g3018 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3018 K13426 - gmx:102663255 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1648 2 30201373 30202358 Pvu2g3018 2 45663178 45664544 PCT