Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3010 ATGGCCACAAAAGGGTCAAGCTCTTCTGCTGCTGCTTCAGCTTCTGGGGATGCAAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCTCAGTACAATGTGTATGGAAACTTGTTCGAGGTGTCTTCCAAGTATGCGCCTCCTATTCGCCCAATTGGTAGAGGCGTTAATGGCATCGTCTGTGCTGCTGTTAATTCTGAAACACACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAATATAGTTGATGCTAAGAGGACATTGAGAGAAATCAAACTCCTTCGTCACATGGAACATGAAAATATCATTGCCATCAAGGATATCATACGACCCCCCAAAAGGGAGACCTTCAATGATGTATACATTGTTTACGAATTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAAACTCTTGGTGAAGAGCATTGCCAGTACTTCTTATACCAGCTGTTACGAGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTAATGAATGCAAACTGTGACCTTAAAATTGGAGACTTTGGGTTGGCAAGAACAACATCTGAAACGGATTTCATGACTGAGTATGTAGTCACACGATGGTACCGTGCCCCAGAACTGCTCCTTAACTGTTCCGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTTGTTGAAATTAAGACCAGAGAACCTTTGTTTCCTGGGAAAGACTATGTTCACCAATTAAGGCTTATAACGGAGTTATTAGGTTCACCTGATGATGCAAGCCTAGAATTTCTCCGAAGTGATAATGCCAGAAGATACATTAGACAGCTTCCACAGTACCGGAAGCAAAAATTCTCCACCAGATTCCCTAACATGTTGCCTGAGGCATTGGACCTGTTAGAGAAGATGCTTATATTTGATCCAAACAAACGCATTACAGTTGATGAGGCACTATGTCACCCTTATCTTTCATCACTCCATAACATCAATGATGAGCCAGTCTGTCCCAGGCCATTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACGTGAAGGAGCTCATTTGGAGGGAATCAGTGAAGTTCAATCCAGATCCACCCTGCCAGTAA 1146 0.4267 MATKGSSSSAAASASGDAKIKRVLTHGGKYAQYNVYGNLFEVSSKYAPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIVDAKRTLREIKLLRHMEHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQTLGEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILVEIKTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSTRFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNINDEPVCPRPFSFDFDQPTCTEEHVKELIWRESVKFNPDPPCQ* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3010 381 ProSitePatterns MAP kinase signature. 82 185 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu2g3010 381 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Pvu2g3010 381 Pfam Protein kinase domain 51 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3010 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 380 - -
Pvu2g3010 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pvu2g3010 381 ProSitePatterns Protein kinases ATP-binding region signature. 53 77 IPR017441 GO:0005524
Pvu2g3010 381 Gene3D Phosphorylase Kinase; domain 1 30 370 - -
Pvu2g3010 381 CDD STKc_TEY_MAPK 40 376 - -
Pvu2g3010 381 SMART serkin_6 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g3010 381 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 21 380 - -
Pvu2g3010 381 Gene3D Transferase(Phosphotransferase) domain 1 131 360 - -
Pvu2g3010 381 ProSiteProfiles Protein kinase domain profile. 47 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3010 Pvu-Chr2 45574376 45577692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3010 6 376 MAP Kinase Gene Family AT4G01370 79.245 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu2g3010 Pkinase 1.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3010 - - gmx:100807109 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1642 2 30143791 30147397 Pvu2g3010 2 45574376 45577692 PCT