Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3005 ATGGCAGCGACAACTACAACAACTTTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACGCAAATATCGAGAAACTACAATCTCCGCTGCGGCTTCTCCTTCTCCTTCTCCAAACCACACCCAAACACCCCCTCATCGTCCAACACCTCAATCCCCTCAACAACCTGCATTGCCCGAATCTCCCTCCACCCACAGGATCCGCTTCTCCCCGGGCCGCTTCTCCCCGATAATGGACTTCGCCCACTCCTCCCCTACCGCTAACGGCCACCATCCGTCCCAGGCCCAGGCCCAGCCCCAGCCCCATGACTTCCCTTCCAGCTTCTCCAAGTTTAACTCCGCCCTCACCGCGGGCCTTTTGAACCCAATGTCCCCCCCGCCCGACAAGACCCGATCCAGCCCAACGCTCTTCGAAATGATGGCCAGCGAGCCCGATGTCCACCACAGGCCCACCACCCACATCCCTCCCACTGCCGTCACCGCCGCCGCTGCTGCGTCCTCGCTCCACAAACCCCAAATTCTCGATCGCCACGCCCTCATGATGCAGCGGATTTCGGACCTGTTAGGGTCACGGAGCCCCGGGAACCAGTTCAACGATGGCGTTTCCAGCGACATTAAGCTCACGCTCAGCTCCAAAGACGGAATCAGTGTCTCCATGAACGTGCATCGCCAAATCCTCGTCGCGCATAGTAGGTTCTTCTCGGTGAAGCTCTCCGATCGCTGGACCAAGCAGCAGCAGCAGCGCTCGCCGGTTCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTGGAGGTTTACATTGAGACCTTGAGGTTGATGTATTGCAAGGATCTTAGGAAGAAGCTAATGAGGGAGGATGTCTCCAGAGTTCTCGGTATCTTGAAGGTTTCAGCCGCCATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCGGCGCCTTGGGCGGAGGATGAGGAAGAGAAGGTGGCGTCTCTCCTTTCTGAGCTTCGTCTTGAAGCGGTTGGCGCAGGGGAGGTTTTGAAGAGGGTTTCAACCGATGCTGCTGCCAATGGAAATGAAGAGGGGAGTGATAATGAGGAGGTTCTTCTTAAGCTTATTCGTGTGGTTCTTGAAGGCAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTAGTGTCGAAGATGCTTCATGAAAATTCTTCTCAGAATGATCTTCGAAAGGAGTCGTTGTACTTAGCATGTGATGATTGTCTGCAGTTACTTCGTCACCATTTTTTGCAGGCTGCGGGTTCGAACTTGCAGGATGTGAGTCAAATTGCAAGACAAGCAGATAATTTGCATTGGATTTTGGATATTTTAGTTGACAGACAAATTGCTGAAGATTTCCTGAAGACATGGGCCTCTCAAGCAGATTTAGCTGAAGCTCATTCTAAAGTGCCAGCAGTTCACAGGTTTGAGATTAGCAGAGTTACAGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAGTTGTTGGCTTCTAAAGATGTTCGGTGTTTGCTTCTAAAAACATGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCCAAGGGGCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACGATTCTTACTCTGCCACTCTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTGATCGTTTCTTGAATTCCGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGCGGAATGGAGAGCAAGAACGGACAAGACAATTACGAATTACAACTACATCAGTTGAGAACCCTTGA 1833 0.5123 MAATTTTTFLKLQNQPTKPKRRKYRETTISAAASPSPSPNHTQTPPHRPTPQSPQQPALPESPSTHRIRFSPGRFSPIMDFAHSSPTANGHHPSQAQAQPQPHDFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDVHHRPTTHIPPTAVTAAAAASSLHKPQILDRHALMMQRISDLLGSRSPGNQFNDGVSSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWTKQQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDAAANGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENSSQNDLRKESLYLACDDCLQLLRHHFLQAAGSNLQDVSQIARQADNLHWILDILVDRQIAEDFLKTWASQADLAEAHSKVPAVHRFEISRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSVENP* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3005 610 MobiDBLite consensus disorder prediction 87 111 - -
Pvu2g3005 610 ProSiteProfiles BTB domain profile. 204 283 IPR000210 GO:0005515
Pvu2g3005 610 Gene3D Potassium Channel Kv1.1; Chain A 186 317 IPR011333 -
Pvu2g3005 610 SUPERFAMILY POZ domain 194 314 IPR011333 -
Pvu2g3005 610 MobiDBLite consensus disorder prediction 1 15 - -
Pvu2g3005 610 MobiDBLite consensus disorder prediction 1 111 - -
Pvu2g3005 610 MobiDBLite consensus disorder prediction 39 58 - -
Pvu2g3005 610 PANTHER OSJNBA0011J08.25 PROTEIN 17 608 - -
Pvu2g3005 610 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 17 608 IPR038920 -
Pvu2g3005 610 Pfam BTB/POZ domain 197 292 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3005 Pvu-Chr2 45511158 45515228 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu2g3005 BTB 0.00015 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3005 - - ccaj:109800730 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3005 2 45511158 45515228 Pvu2g3005 2 45511158 45515228 ECH
Pvu2g3005 2 45511158 45515228 Pvu9g1551 9 21889332 21892137 PCT