Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2975 ATGGGTTGTGAATTTTCTAAGTACACAACATGCTGCATGGGTACAGAGGAGGATGGTCATCCGGTTCCTGAGGACCAGGTTGAGGGTGAAAACGAAGACAATATTGTTGAGAGCATTGACTTGCCACGGTTTCATGAATTCACCATTGATCAGCTTAGGAGGGCTACATCCGGATTTGCTGTTGAAAATATAGTTTCTGAGCATGGAGAAAAAGCTCCAAATGTGGTCTATAAAGGGAAACTTGATAATCAGATGCGAATTGCCGTTAAACGGTTCAACAGAAATGCCTGGCCTGATGCGCAGCCATTTTTGGAGGAGGCCAGGGCTGTTGGTCAACTGAGGAGCCAGCGATTGATAAATCTGCTAGGATGTTGTTGTGAAGGTGACGAGAGGTTACTTGTTGCAGAATATATGCCCAATGATACGTTGGCAAAACATTTATTCCATTGGGAAAATGAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCATTATGCCTTGCCCAAGCTCTAGAGTACTGTACCAGCAATGGACGTGCACTATATCATGATCTAAATGCCTACAGAGTTCTTTATGATGACGACTACAATCCTAGACTTTCATGCTTCGGTTTGATGAAAAATAGCAGAGATGGAAAAAGTTATAGTACGAATTTGGCGTTTACTCCACCTGAATATCTAAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTACAGCTTTGGCACACTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATGCCCTTGACTTAATTAGAGACAAGAACCTTCAGATGCTATCAGACTCTTGCTTAGAAGGGGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCCTCACTATGTTTGCAATCTGAACCACGAGAGCGTCCTAGTCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCGCGTACTGATGGGTATACCAGATGGTACATCTACTTTCCCCCTTACACCTCTAGGAGAAGCTTGTCTACGAATGGATCTGACTGCTCTGCATGAGGTGATGGAGAAAATGGGGTATAAAGACGATGAGGGCGCAGCAACTGAGCTTTCGTTCCAAATGTGGACGAACCAGATGCAGGACACGTTGGACTCAAAGAAGAAAGGGGATGCTGCTTTTCGGCTTAAGGATTCTAAAACGGCAATTGATAGCTATACGCTGTTCATTGATGTTGGAACCATGGTTTCTCCAACGGTTTATGCACGTCGTAGTTTATGTTATCTTATGAGCAACATGGCTGATGAAGCACTTAATGATGCAATGCAAGCCCAAGTAATATCCCCCATTTGGTACATTGCGTTTTATTTACAAGCAGTTGCACTTTTAGCAATGGGCAAGGAGAATGATGCCCAAATGGCACTTAAAGAGGGTTCCTCACTTGAAATTAAAAAGAGCACAAATTAG 1473 0.4379 MGCEFSKYTTCCMGTEEDGHPVPEDQVEGENEDNIVESIDLPRFHEFTIDQLRRATSGFAVENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPDAQPFLEEARAVGQLRSQRLINLLGCCCEGDERLLVAEYMPNDTLAKHLFHWENEPMRWAMRMRVALCLAQALEYCTSNGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASLCLQSEPRERPSPKSLVAALIPLQKDSEVPSRVLMGIPDGTSTFPLTPLGEACLRMDLTALHEVMEKMGYKDDEGAATELSFQMWTNQMQDTLDSKKKGDAAFRLKDSKTAIDSYTLFIDVGTMVSPTVYARRSLCYLMSNMADEALNDAMQAQVISPIWYIAFYLQAVALLAMGKENDAQMALKEGSSLEIKKSTN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2975 490 Gene3D Phosphorylase Kinase; domain 1 34 137 - -
Pvu2g2975 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Pvu2g2975 490 SUPERFAMILY TPR-like 388 482 IPR011990 GO:0005515
Pvu2g2975 490 PANTHER TPR DOMAIN KINASE 1 490 - -
Pvu2g2975 490 ProSiteProfiles Protein kinase domain profile. 62 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2975 490 SUPERFAMILY Protein kinase-like (PK-like) 41 322 IPR011009 -
Pvu2g2975 490 Gene3D Tetratricopeptide repeat domain 383 490 IPR011990 GO:0005515
Pvu2g2975 490 Gene3D Transferase(Phosphotransferase) domain 1 139 330 - -
Pvu2g2975 490 Pfam Protein tyrosine and serine/threonine kinase 75 312 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2975 Pvu-Chr2 45218036 45229295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2975 47 338 Glycoside Hydrolase AT3G07070 33.125 1.21e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pvu2g2975 PK_Tyr_Ser-Thr 6.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2975 K14500 - gmx:100819210 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2975 2 45218036 45229295 Pvu2g2975 2 45218036 45229295 ECH