Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2974 ATGGATGGGAGAGAGATTATGGCATTTCCTGGTGGCTCAGCTTCATATTACATGCATAGAGGAGGGGTTGGAGGGTCTGGTTCTGGACCACTCAGTGGGGGAGGGGAGTTCCAAGCAGCCCCTGGGTTCAGACCTTTGTCAAACACTGGCATTCAAGCTGAGTCGAATTCAAGGGGTCAAGGGGGTGGTTCTGTAGGCTCTAGCTCCACATTTTCCGTGGATCCTCCTCAGGTTCGTGCCAATTTTAACCATGGCATTGGCATTGGCATTGGCGCTGGGGGACCTTCAAGTGAGCCGGTGAAGAAGAAAAGAGGGAGACCCCGTAAATATGGTCCTGATGGAACAGTTTCTCTGAGATTGTCTCCAATGTCTGCCCCCGCTAACTCCACTCAGGGTGAAAGTGCAATAACCCTTTCTCAAAAAAAGGGAAGAGGGCGCCCACCTGGATCTGGAAGGAAGCAACAGCTAGCTGCATTAGGTGAATGGATGAATAGTTCAGCAGGCTTGGCCTTTTCACCTCATGTTGTCACTATTGGAGTTGGGGAGGACATTGTGGCAAAGTTATTGTTATTATCTCAGCAGAGACCAAGGGCTCTTTGCGTTTTGTCAGGCACTGGTACAGTTTCTTCAGTCACTCTACGGCAGCCTGCTTCTACCAATGCCAGTGTAACTTTTGAGGGACGATTCCAAATACTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCCTCTAATAGAACTGGTGGCATTAGTGTTTCACTTTCTAGTCCCGATGGTCATGTTATTGGTGGTGGTGTTGCTGTGCTTATTGCTGGAAGCCCAGTGCAGGTGGTACTGTGCAGTTTTGTTTATGGTGGCTCGAAGTCCAAGCCTAAACAAGGGCTCACTATCACAGAGGAAAGTTCTGAGCAGCCTCAGCACAATGACAAGATGGCTTCTCCAGCCAGTGCTCCACCTGGTCAAAATCAAAACTACCTCCATTCTGGCACACACATTTGGCCTGGATCTCAACCACCAGAGCTGAAAAGCACGCAAACCCATACTGGCATTGACTTGACTCGTGGGTGA 1077 0.4949 MDGREIMAFPGGSASYYMHRGGVGGSGSGPLSGGGEFQAAPGFRPLSNTGIQAESNSRGQGGGSVGSSSTFSVDPPQVRANFNHGIGIGIGAGGPSSEPVKKKRGRPRKYGPDGTVSLRLSPMSAPANSTQGESAITLSQKKGRGRPPGSGRKQQLAALGEWMNSSAGLAFSPHVVTIGVGEDIVAKLLLLSQQRPRALCVLSGTGTVSSVTLRQPASTNASVTFEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSPDGHVIGGGVAVLIAGSPVQVVLCSFVYGGSKSKPKQGLTITEESSEQPQHNDKMASPASAPPGQNQNYLHSGTHIWPGSQPPELKSTQTHTGIDLTRG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2974 358 Gene3D - 173 306 - -
Pvu2g2974 358 MobiDBLite consensus disorder prediction 27 153 - -
Pvu2g2974 358 SUPERFAMILY AF0104/ALDC/Ptd012-like 170 295 - -
Pvu2g2974 358 Pfam Plants and Prokaryotes Conserved (PCC) domain 173 286 IPR005175 -
Pvu2g2974 358 MobiDBLite consensus disorder prediction 48 77 - -
Pvu2g2974 358 MobiDBLite consensus disorder prediction 291 358 - -
Pvu2g2974 358 ProSiteProfiles PPC domain profile profile. 165 306 IPR005175 -
Pvu2g2974 358 MobiDBLite consensus disorder prediction 121 138 - -
Pvu2g2974 358 CDD DUF296 173 285 IPR005175 -
Pvu2g2974 358 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 358 - -
Pvu2g2974 358 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 358 IPR039605 GO:0003680
Pvu2g2974 358 MobiDBLite consensus disorder prediction 294 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2974 Pvu-Chr2 45209055 45213550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2974 1 358 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.354 9.37e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2974 - - gmx:100813888 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2974 2 45209055 45213550 Pvu2g2974 2 45209055 45213550 ECH
Pvu2g1619 2 29904941 29909275 Pvu2g2974 2 45209055 45213550 PCT