Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2969 ATGACATTTTGTTCTCAGGAAGAGACCATTCGCGAGGCCATTGAAGATGCTGGATTCCAAGCCACATTAATCAGAGATGATAACGAGACATCTGTTCAGATATGCCGCATACGTATCCAAGGCATGACATGCACGTCGTGTTCCTCCACTGTTGAGTCTGCACTTCAATCAATCCAAGGAGTGGTGAAAGCCCAAGTGGCCCTTGCAACTGAGGAAGCTGAAGTTCACTACACTCCAAACGTTGTCACCTACAACCAAATCTTGGAAGCTGTAGAAGACACTGGTTTTCAAGCCACGCTTATCAGCACAGGTGAAGACATGAGCAGAATAGACCTTCAGGTAGAGGGCGTAAGGACGGGTCGTTCCATGAGACTAATTGAAAATTCTCTTCAAGCCCTCCCTGGAGTCGAAGGTGTAGAGACACACCCTTTGTTGAACAAAGTGTCTCTTTCTTATAAACCAGACTTGACAGGACCAAGAAATTTCATTAACGTGATTCAAGAAACCGGGTCTAGGCGTTTCAAGGCAAAGATTTTCCCGGAAGGAGGGAGAAGGAATAGTCATAGGAGGGAGGAAATCAAGCAATACTATAGATCCTTCTTGTGGAGTTTGGTGTTTACTATTCCTGTGTTTCTAACGTCCATGGTGCTTATGTATATCCCTGGAATTAAGCATGGACTAGATGCCAAAGTTGTTAAAATGCTTACAGTGGGGGAGATTATAAGATTCGTGCTTGCTACACCAGTACAGTTCATTATAGGGAAGAGGTTTTACTCTGGTGCTTACAAAGCATTACGCCTTGGCTCTCCCAACATGGATGTTTTGATTGCCTTGGGGACAAACGCAGCATACTTTTACTCAGTGTATTCTGTGCTGAGAGCTTCTACATCTAATAGTTTTAAGGGTACTGATTTCTTTGAGACCAGTGCTATGCTTATTTCGTTTATTTTGCTAGGGAAGTACCTTGAGGTTTTGGCCAAGGGGAAGACATCCGATGCAATTGCCAAGCTCATGAACTTGACACCTGACAGTGCTATATTGTTGACGTTGGACAGTGAAGGAAATGTTGTTGGTGAGGAGGAAATTGATAGCAGGTTGATTCAGAAGAATGATGTCATTAAGATCATTCCTGGTTCAAAAGTGGCTTCCGACGGATTTGTTATTTGGGGTCAGAGCCACGTGAATGAGAGCATGATAACAGGTGAGGCACGTCCTGTGGCAAAGAGGAAAGGGGATACTGTTATTGGAGGAACTGTGAATCAAAATGGAGTGTTACATATTAAGGCTACATGGGTGGGATCAGAGAGTGCGCTTGCTCAGATTGTCAGACTTGTTGAGTCAGCACAGATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGCATTTCCAAATACTTTGTGCCTATGGTTATTGTAATCTCATTTTCAACTTGGCTTGCCTGGTTTATAGCTGGAAGGGTTAGTGCTTACCCGAAGTCTTGGATACCATCTTCCATGGATAGCTTTCAGCTTGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCCTGTCCATGTGCTTTAGGTTTAGCAACACCAACTGCAGTCATGGTTGGTACTGGAGTAGGTGCATCTCAGGGAATACTTATCAAAGGAGGTCAAGCATTAGAAAATGCACATAAGGTGAACTGCGTTGTATTTGACAAGACAGGTACTCTCACTATAGGGAAGCCTGTGGTAGTAAATACAAAGTTGTTAACAAATATGGTACTCCGAGAATTCTATGAACTTGTGGCTGCAGCTGAGGTGAATAGTGAGCATCCCCTGGCGAAGGCCACTGTTGAGTATGCTAAAAGACTGAGAGATGAAGAGAACCCCATTTGGCCTGAGGCACGGGATTTTGTGTCCATTGCTGGACATGGAGTTAAGGCCATGGTTAGAAATAAGGAAATACTTGTGGGTAACAAAACCTTGATGGCGGACCACAATGTTGCACTTCCTGCTGATGCTGAAGAGATACTGGCAGAAGCGGAAGCAATGGCTCAAACTGGAATTCTAGTGTCTATAAATAGGGAAGTAATTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCACAAGAAGTCATTTCCATTCTTAAGTCTATGAAAATTAGGAGCATCATGGTTACTGGGGACAATTGGGGAACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACTGTTATTGCTGAAGCCAAACCTGGGCAGAAGGCTGAGCAAGTGAAGGACTTGCAGGCTTCTGGGCAAAGGGTGGCTATGGTGGGGGATGGTATCAATGACTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATAGGTGCTGGTACAGACATTGCTATTGAGGCTGCTGATATTGTCCTAATGAAGAGCAATTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTTCCCGTATCCGTCTCAACTACATATGGGCGTTGGGCTATAATCTGCTAGGAATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCGGTTGCCACCATGGGTTGCTGGGGCTGCCATGGCTGCCTCTTCTGTCAGTGTGGTTTGCTGTTCTCTACTATTGAAGTATTATAGGAGACCCAAGAAGCTGGACAATCTTGAGATACGGGGCATAAGCATTGAGTGA 2679 0.4464 MTFCSQEETIREAIEDAGFQATLIRDDNETSVQICRIRIQGMTCTSCSSTVESALQSIQGVVKAQVALATEEAEVHYTPNVVTYNQILEAVEDTGFQATLISTGEDMSRIDLQVEGVRTGRSMRLIENSLQALPGVEGVETHPLLNKVSLSYKPDLTGPRNFINVIQETGSRRFKAKIFPEGGRRNSHRREEIKQYYRSFLWSLVFTIPVFLTSMVLMYIPGIKHGLDAKVVKMLTVGEIIRFVLATPVQFIIGKRFYSGAYKALRLGSPNMDVLIALGTNAAYFYSVYSVLRASTSNSFKGTDFFETSAMLISFILLGKYLEVLAKGKTSDAIAKLMNLTPDSAILLTLDSEGNVVGEEEIDSRLIQKNDVIKIIPGSKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNQNGVLHIKATWVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPMVIVISFSTWLAWFIAGRVSAYPKSWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGILIKGGQALENAHKVNCVVFDKTGTLTIGKPVVVNTKLLTNMVLREFYELVAAAEVNSEHPLAKATVEYAKRLRDEENPIWPEARDFVSIAGHGVKAMVRNKEILVGNKTLMADHNVALPADAEEILAEAEAMAQTGILVSINREVIGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIETVIAEAKPGQKAEQVKDLQASGQRVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPSTRFRLPPWVAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2969 892 Pfam haloacid dehalogenase-like hydrolase 555 777 - -
Pvu2g2969 892 SUPERFAMILY HAD-like 558 869 IPR036412 -
Pvu2g2969 892 CDD P-type_ATPase_Cu-like 198 873 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 559 573 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 688 699 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 710 720 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 763 782 - -
Pvu2g2969 892 PRINTS P-type cation-transporting ATPase superfamily signature 786 798 - -
Pvu2g2969 892 SUPERFAMILY Calcium ATPase, transduction domain A 359 445 IPR008250 -
Pvu2g2969 892 ProSitePatterns Heavy-metal-associated domain. 39 68 IPR017969 GO:0046872
Pvu2g2969 892 SUPERFAMILY HMA, heavy metal-associated domain 31 104 IPR036163 GO:0046872
Pvu2g2969 892 Gene3D - 33 105 - -
Pvu2g2969 892 Gene3D - 644 694 IPR023299 GO:0000166
Pvu2g2969 892 Gene3D - 566 643 IPR023299 GO:0000166
Pvu2g2969 892 Pfam Heavy-metal-associated domain 37 96 IPR006121 GO:0046872
Pvu2g2969 892 PANTHER ATP7, ISOFORM B 6 883 - -
Pvu2g2969 892 SFLD C1.7: P-type atpase like 541 815 - -
Pvu2g2969 892 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 6 883 - -
Pvu2g2969 892 ProSiteProfiles Heavy-metal-associated domain profile. 109 170 IPR006121 GO:0046872
Pvu2g2969 892 SFLD p-type atpase 541 815 IPR044492 -
Pvu2g2969 892 ProSiteProfiles Heavy-metal-associated domain profile. 34 100 IPR006121 GO:0046872
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 34 59 - -
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 60 83 - -
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 89 109 - -
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 200 221 - -
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 235 255 - -
Pvu2g2969 892 PRINTS Copper-transporting ATPase 1 signature 255 280 - -
Pvu2g2969 892 CDD HMA 37 99 IPR006121 GO:0046872
Pvu2g2969 892 Pfam E1-E2 ATPase 358 537 - -
Pvu2g2969 892 SUPERFAMILY HMA, heavy metal-associated domain 103 171 IPR036163 GO:0046872
Pvu2g2969 892 Gene3D - 107 179 - -
Pvu2g2969 892 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 272 872 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu2g2969 892 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 312 844 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g2969 892 Gene3D - 327 449 - -
Pvu2g2969 892 ProSitePatterns E1-E2 ATPases phosphorylation site. 561 567 IPR018303 -
Pvu2g2969 892 Gene3D - 526 820 IPR023214 -
Pvu2g2969 892 SUPERFAMILY Calcium ATPase, transmembrane domain M 299 839 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2969 Pvu-Chr2 45187688 45191246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2969 8 892 Primary Pumps ATPases AT1G63440 78.788 0.0 1444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2969 K17686 - gmx:100810141 1617.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2969 2 45187688 45191246 Pvu2g2969 2 45187688 45191246 ECH
Pvu2g1614 2 29860710 29865033 Pvu2g2969 2 45187688 45191246 PCT